Grantech SYS86350V4GA User manual

i
(v1.x) Industrial Computer Board
SYS86350V4GA

viii
Preface MS-98H1
CONTENTS
Copyright Notice............................................................................................ ii
Trademarks ................................................................................................... ii
Revision History ............................................................................................ ii
Technical Support.......................................................................................... ii
Safety Instructions.........................................................................................iii
Chemical Substances Information ............................................................... iv
Battery Information....................................................................................... iv
CE Conformity............................................................................................... v
FCC-A Radio Frequency Interference Statement ......................................... v
WEEE Statement .......................................................................................... v
Japan JIS C 0950 Material Declaration........................................................ vi
India RoHS................................................................................................... vi
Turkey EEE Regulation................................................................................ vi
Ukraine Restriction of Hazardous Substances............................................. vi
Vietnam RoHS .............................................................................................vii
1. Overview.......................................................................................1-1
Mainboard Specications...........................................................................1-2
Mainboard Layout ......................................................................................1-4
2. Hardware Setup ...........................................................................2-1
CPU (Central Processing Unit) ..................................................................2-3
Memory ......................................................................................................2-6
Power Supply.............................................................................................2-8
Rear Panel I/O ...........................................................................................2-9
Connector................................................................................................. 2-11
Jumper .....................................................................................................2-17
Slot...........................................................................................................2-19

ix
Preface
Appendix WDT & GPIO ................................................................... A-1
WDT Sample Code ................................................................................... A-2
GPIO Sample Code .................................................................................. A-3

1-1-1
Thank you for choosing the SYS86350V4GA, an excellent industrial
computer board.
Based on the innovative Intel® H81/ Q87 chipset for optimal system
effciency, the 86350 accommodates the Intel ® Haswell processor
and supports up to 2 DDR3/DDR3L 1333/1600 MHz SO-DIMM slots to
provide the maximum of 16 GB memory capacity.
In the advanced-level and mid-range market segment, 86350 provides
a high-performance solution for today’s front-end and general purpose
workstation, as well as in the future.
1Overview

1-2
Overview MS-98H1
Mainboard Specications
Processor
■4th generation Intel Core i3/ i5/ i7, Pentium, Celeron processor (LGA1150)
Chipset
■SKU1, SKU2: Intel H81
■SKU3: Intel Q87
Memory
■2 x DDR3/DDR3L 1333/1600 MHz SO-DIMM slots
■Up to 16 GB
■Dual-Channel mode
LAN
■SKU1
-LAN1: Intel I210-AT Gigabit Fast Ethernet controller
-LAN2: Intel I210-AT Gigabit Fast Ethernet controller
-LAN3: Intel I210-AT Gigabit Fast Ethernet controller
-LAN4: Intel I210-AT Gigabit Fast Ethernet controller
■SKU2, SKU3
-LAN1: Intel I211-AT Gigabit Fast Ethernet controller
-LAN2: Intel I211-AT Gigabit Fast Ethernet controller
SATA
■2 x SATA 6Gb/s ports
■1 x mSATA slot (shared with full-size Mini-PCIe slot)
Audio
■Realtek ALC887 audio codec
■1 x front audio connector
■1 x amplier connector
Graphics
■Graphics integrated in Intel processor
Rear Panel I/O
■SKU1
-1x PS/2 mouse/keyboard
combo port
-2x VGA ports
-4 x RJ45 GbE LAN ports
-4x USB 2.0 ports
-2x USB 3.0 ports
-1x DVI-D port
-1x HDMI port
■SKU2, SKU3
-1x PS/2 mouse/keyboard
combo port
-2x VGA ports
-2 x RJ45 GbE LAN ports
-4x USB 2.0 ports
-2x USB 3.0 ports
-1x DVI-D port
-1x HDMI port

1-3
Overview
Onboard Headers/ Connectors/ Jumpers
■SKU1
-1x 4-pin power connector
-1x 24-pin power connector
-1x system fan connector
-1x CPU fan connector
-2 x SATA 6Gb/s ports
-1 x USB 2.0 connector (2 ports)
-2 x RS-232/422/485 serial port
connectors (2 ports)
-1 x RS-232 serial port header
(4 ports)
-1 x GPIO connector
-1 x front panel header
-2 x LAN LED connectors
-1 x front audio connector
-1 x amplier connector
- 1 x clear CMOS jumper
-3 x serial port power jumpers
- 1 x AT/ATX select jumper
-4 x non-volatile memory
jumpers
■SKU2, SKU3
-1x 4-pin power connector
-1x 24-pin power connector
-1x system fan connector
-1x CPU fan connector
-2 x SATA 6Gb/s ports
-1 x USB 2.0 connector (2 ports)
-2 x RS-232/422/485 serial port
connectors (2 ports)
-2 x RS-232 serial port header
(8 ports)
-1 x GPIO connector
-1 x front panel header
-1 x LAN LED connector
-1 x front audio connector
-1 x amplier connector
- 1 x clear CMOS jumper
-4 x serial port power jumpers
- 1 x AT/ATX select jumper
-2 x non-volatile memory
jumpers
Slot
■1 x PCIe x16 slot (Gen2 for H81, Gen3 for Q87)
■1 x full-size Mini-PCIe slot (MINI_PCIE1, shared with mSATA)
■1 x half-size Mini-PCIe slot (MINI_PCIE2)
Form Factor
■Mini-ITX: 170 mm x 170 mm
Environmental
■Operating Temperature: -10 ~ 60oC
■Storage Temperature: -20 ~ 80oC
■Humidity: 5 ~ 95% RH, non-condensing
SKU Comparison
SKUs
Features
SKU1 SKU2 SKU3
PCH H81 H81 Q87
LAN port 4 2 2
COM port 6 10 10

1-4
Overview MS-98H1
Mainboard Layout
SYS86350V4GA SKU1
Front Audio
Connector
System Fan
Connector
Clear CMOS
Jumper
AT/ATX
Jumper
COM Port
Connector
USB
Connector
SATA
Port
GPIO
Connector
CPU Fan
Connector
COM Port
Jumper
NVM
Jumper
Power
Connector
Power
Connector
PCIe Slot
Back Panel
Amplier
Connector
LAN LED
Connector
SO-DIMM
Slots
Front Panel
Header
COM Port
Header
COM Port
Jumper
COM Port
Connector
COM Port
Jumper
VGA Port
USB 2.0
Port
Mouse/
Keyboard
Combo
Port
USB 2.0
Port
HDMI PortVGA Port USB 3.0
Port
RJ45 GbE
LAN Port DVI-D Port
RJ45 GbE
LAN Port
RJ45 GbE
LAN Port

1-5
Overview
SYS86350VGGA-10C SKU2, SKU3
Front Audio
Connector
System Fan
Connector
Clear CMOS
Jumper
AT/ATX
Jumper
COM Port
Connector
USB
Connector
SATA
Port
GPIO
Connector
CPU Fan
Connector
COM Port
Jumper
NVM
Jumper
Power
Connector
Power
Connector
PCIe Slot
Back Panel
Amplier
Connector
LAN LED
Connector
SO-DIMM
Slots
Front Panel
Header
COM Port
Header
COM Port
Jumper
COM Port
Connector
COM Port
Jumper
COM Port
Jumper
VGA Port
USB 2.0
Port
Mouse/
Keyboard
Combo
Port
USB 2.0
Port
HDMI PortVGA Port USB 3.0
Port
RJ45 GbE
LAN Port DVI-D Port
RJ45 GbE
LAN Port

2-2-1
This chapter provides you with the information about hardware setup
procedures. While doing the installation, be careful in holding the com-
ponents and follow the installation procedures. For some components, if
you install in the wrong orientation, the components will not work prop-
erly.
Use a grounded wrist strap before handling computer components. Static
electricity may damage the components.
2Hardware Setup

2-2
Hardware Setup MS-98H1
Components Reference Guide
CPU (Central Processing Unit)........................................................2-3
Memory..............................................................................................2-6
Power Supply....................................................................................2-8
System Power Connector: JPWR1 ............................................................2-8
CPU Power Connector: JPWR2.................................................................2-8
Rear Panel I/O ...................................................................................2-9
Connector........................................................................................2-11
Fan Power Connector: CPUFAN1, SYSFAN1 ......................................... 2-11
GPIO Connector: JGPIO1........................................................................2-12
Serial ATA Connector: SATA1, SATA2......................................................2-12
Audio Amplier Connector: JSPK1...........................................................2-13
Front Audio Connector: JAUD1................................................................2-13
Front Panel Header: JFP1 .......................................................................2-13
RS-232/422/485 Serial Port Connector: JCOM1, JCOM2 .......................2-14
RS-232 Serial Port Header: JCOM3, JCOM4..........................................2-15
USB 2.0 Connector: JUSB1.....................................................................2-16
LAN LED Connector: JLANLED1, JLANLED2 ........................................2-16
Jumper.............................................................................................2-17
Clear CMOS Jumper: JCMOS1 ...............................................................2-17
AT/ATX Select Jumper: JAT1...................................................................2-17
Serial Port Power Jumper: JCOMP1, JCOMP2, JCOMP3, JCOMP4 .....2-18
Non-Volatile Memory Jumper: JNVM1, JNVM2, JNVM3, JNVM4 ...........2-18
Slot...................................................................................................2-19
PCIe (Peripheral Component Interconnect Express) Slot........................2-19
Mini-PCIe (Peripheral Component Interconnect Express) Slot................2-19

2-3
Hardware Setup
CPU (Central Processing Unit)
When installing the CPU, make sure that you install the cooler to prevent over-
heating. If you do not have the CPU cooler, consult your dealer before turning on
the computer.
Important
Overheating
Overheating will seriously damage the CPU and system. Always make sure the
cooling fan can work properly to protect the CPU from overheating. Make sure
that you apply an even layer of thermal paste (or thermal tape) between the CPU
and the heatsink to enhance heat dissipation.
Replacing the CPU
While replacing the CPU, always turn off the power supply or unplug the power
supply’s power cord from the grounded outlet rst to ensure the safety of CPU.
Introduction to LGA 115x CPU
The surface of LGA 115x CPU. Remember to apply some thermal paste on it for
better heat dispersion.
Alignment Key
Yellow triangle is the
Pin 1 indicator
Alignment Key

2-4
Hardware Setup MS-98H1
CPU Installation
When you are installing the CPU, make sure the CPU has a cooler attached on
the top to prevent overheating. Meanwhile, do not forget to apply some thermal
paste on CPU before installing the heat sink/cooler fan for better heat disper-
sion.
1. Open the load lever and remove the
plastic cap.
2. Lift the load lever up to fully open
position.
3. After con󰘰rming the CPU direction for
correct mating, put down the CPU in
the socket housing frame. Be sure to
grasp on the edge of the CPU base.
Note that the alignment keys are
matched.
4. Engage the load lever while pressing
down lightly onto the load plate.
Alignment Key
Important
Visually inspect if the CPU is seated well into the socket. If not, take out the CPU with
pure vertical motion and reinstall.

2-5
Hardware Setup
5. Secure the load lever with the hook
under the retention tab.
6. Make sure the four hooks are in proper
position before you install the cooler.
Align the holes on the motherboard
with the cooler. Push down the cooler
until its four clips get wedged into the
holes of the motherboard.
7. Press the four hooks down to fasten
the cooler. Turn over the motherboard
to con󰘰rm that the clip-ends are
correctly inserted.
8. Finally, attach the CPU Fan cable
to the CPU fan connector on the
motherboard.
Important
• Conrm if your CPU cooler is rmly installed before turning on your system.
• Do not touch the CPU socket pins to avoid damage.
• Whenever CPU is not installed, always protect your CPU socket pins with the plastic
cap covered.
• Please refer to the documentation in the CPU cooler package for more details about
the CPU cooler installation.
• Read the CPU status in BIOS.

2-6
Hardware Setup MS-98H1
Memory
Dual-Channel Mode
In Dual-Channel mode, make sure that you install memory modules of the same
type and density in different channel DIMM slots.
Recommended Memory Population
Number of DIMMs installed 1 2
DIMM1 (ch A) V V
DIMM2 (ch B) V
Important
• "V" indicates a populated DIMM slot.
• Paired memory installation for Max performance.
• Populate the same DIMM type in each channel, specically: 1. Use the same
DIMM size; 2. Use the same number of ranks per DIMM.

2-7
Hardware Setup
Installing Memory Modules
1. Unlock the DIMM slot by ip-
ping open its side clips.
2. Vertically insert the DIMM into
the DIMM slot. The DIMM
has an off-center notch at the
bottom that will only allow it to
t one way into the DIMM slot.
Push the DIMM deeply into the
DIMM slot. The side clips of
the slot will automatically close
when the DIMM is properly
seated and an audible click
should be heard.
3. Manually check if the DIMM
has been locked in place by the
DIMM slot’s side clips.
Important
• Motherboard photos shown in
this section are for demonstra-
tion only and may differ from the
actual look of your motherboard.
• You can barely see the golden
nger if the DIMM is properly in-
serted in the DIMM slot.
Important
To enable successful system bootup, always insert the memory module into the
DIMM1 rst.

2-8
Hardware Setup MS-98H1
Power Supply
System Power Connector: JPWR1
This connector allows you to connect a power supply. To connect to the power
supply, make sure the plug of the power supply is inserted in the proper orienta-
tion and the pins are aligned. Then push down the power supply rmly into the
connector.
CPU Power Connector: JPWR2
This connector is used to provide power to the CPU.
4.+12V
2.Ground
3.+12V
1
.Ground
Important
Make sure that all power connectors are connected to the power supply to ensure
stable operation of the motherboard.

2-9
Hardware Setup
Rear Panel I/O
VGA Port
USB 2.0
Port
Mouse/
Keyboard
Combo
Port
USB 2.0
Port
HDMI PortVGA Port USB 3.0
Port
RJ45 GbE
LAN Port DVI-D Port
RJ45 GbE
LAN Port
RJ45 GbE
LAN Port
VGA Port
USB 2.0
Port
Mouse/
Keyboard
Combo
Port
USB 2.0
Port
HDMI PortVGA Port USB 3.0
Port
RJ45 GbE
LAN Port DVI-D Port
RJ45 GbE
LAN Port
SKU1
SKU2, SKU3
hMouse / Keyboard Combo Port
The standard PS/2® mouse/keyboard DIN connector is for a PS/2® mouse/key-
board.
hVGA Port
The DB15-pin female connector is provided for monitor.
hUSB 2.0 Port
The USB (Universal Serial Bus) port is for attaching USB devices such as key-
board, mouse, or other USB-compatible devices.
hUSB 3.0 Port
The USB 3.0 port is backward-compatible with USB 2.0 devices and supports
data transfer rate up to 5 Gbit/s (SuperSpeed).

2-10
Hardware Setup MS-98H1
hRJ45 GbE LAN Port
The standard RJ45 LAN jack is provided for connection to the Local Area Network (LAN).
You can connect a network cable to it.
Active LED Speed
LED
LED LED Status Description
Active
LED
Off No link
Yellow Linked
Blinking Data activity
Speed
LED
Off 10 Mbps connection
Green 100 Mbps connection
Orange 1 Gbps connection
hDVI-D Port
The DVI-D (Digital Visual Interface-Digital) connector allows you to connect an
LCD monitor. It provides a high-speed digital interconnection between the com-
puter and its display device. To connect an LCD monitor, simply plug your monitor
cable into the DVI connector, and make sure that the other end of the cable is
properly connected to your monitor (refer to your monitor manual for more infor-
mation.)
hHDMI Port
The High-Denition Multimedia Interface (HDMI) is an all-digital audio/video in-
terface capable of transmitting uncompressed streams. HDMI supports all TV
format, including standard, enhanced, or high-denition video, plus multi-channel
digital audio on a single cable.

2-11
Hardware Setup
Connector
Fan Power Connector: CPUFAN1, SYSFAN1
The fan power connectors support system cooling fan with +12V. When con-
necting the wire to the connectors, always note that the red wire is the positive
and should be connected to the +12V; the black wire is Ground and should be
connected to GND. If the motherboard has a System Hardware Monitor chipset
onboard, you must use a specially designed fan with speed sensor to take advan-
tage of the CPU fan control.
Important
• Please refer to the recommended CPU fans at processor’s ofcial website or
consult the vendors for proper CPU cooling fan.
• Fan cooler sets with 3- or 4-pin power connector are both available.

2-12
Hardware Setup MS-98H1
GPIO Connector: JGPIO1
This connector is provided for the General-Purpose Input/Output (GPIO) periph-
eral module.
Serial ATA Connector: SATA1, SATA2
This connector is a high-speed Serial ATA interface port. Each connector can
connect to one Serial ATA device.
Important
Please do not fold the SATA cable into a 90-degree angle. Otherwise, data loss
may occur during transmission.