Supero SuperServer 6027R-3RF4+ User manual

®
SUPERSERVER
6027R-3RF4+
SUPER
USER’S MANUAL
1.0b

The information in this User’s Manual has been carefully reviewed and is believed to be accurate.
The vendor assumes no responsibility for any inaccuracies that may be contained in this document,
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person or organization of the updates. Please Note: For the most up-to-date version of this
manual, please see our web site at www.supermicro.com.
Super Micro Computer, Inc. ("Supermicro") reserves the right to make changes to the product
described in this manual at any time and without notice. This product, including software and docu-
mentation, is the property of Supermicro and/or its licensors, and is supplied only under a license.
Any use or reproduction of this product is not allowed, except as expressly permitted by the terms
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SPECULATIVE OR CONSEQUENTIAL DAMAGES ARISING FROM THE USE OR INABILITY TO
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Clara County in the State of California, USA. The State of California, County of Santa Clara shall
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claims will not exceed the price paid for the hardware product.
FCC Statement: This equipment has been tested and found to comply with the limits for a Class A
digital device pursuant to Part 15 of the FCC Rules. These limits are designed to provide reasonable
protection against harmful interference when the equipment is operated in a commercial environ-
ment. This equipment generates, uses, and can radiate radio frequency energy and, if not installed
and used in accordance with the manufacturer’s instruction manual, may cause harmful interference
with radio communications. Operation of this equipment in a residential area is likely to cause harmful
interference, in which case you will be required to correct the interference at your own expense.
California Best Management Practices Regulations for Perchlorate Materials: This Perchlorate warn-
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Material-special handling may apply. See www.dtsc.ca.gov/hazardouswaste/perchlorate”
WARNING: Handling of lead solder materials used in this
product may expose you to lead, a chemical known to the
State of California to cause birth defects and other repro-
ductive harm.
Manual Revision 1.0b
Release Date: August 13, 2013
Unless you request and receive written permission from Super Micro Computer, Inc., you may not
copy any part of this document.
Information in this document is subject to change without notice. Other products and companies
referred to herein are trademarks or registered trademarks of their respective companies or mark
holders.
Copyright © 2013 by Super Micro Computer, Inc.
All rights reserved.
Printed in the United States of America

iii
Preface
Preface
About This Manual
This manual is written for professional system integrators and PC technicians. It
provides information for the installation and use of the SuperServer 6027R-3RF4+.
Installation and maintainance should be performed by experienced technicians only.
The SuperServer 6027R-3RF4+ is a high-end server based on the SC825TQ-
R740LPB 2U rackmountable chassis and the X9DR3-LN4F+ dual processor
serverboard.
Manual Organization
Chapter 1: Introduction
The first chapter provides a checklist of the main components included with the
server system and describes the main features of the X9DR3-LN4F+ serverboard
and the SC825TQ-R740LPB chassis.
Chapter 2: Server Installation
This chapter describes the steps necessary to install the SuperServer 6027R-3RF4+
into a rack and check out the server configuration prior to powering up the system.
If your server was ordered without processor and memory components, this chapter
will refer you to the appropriate sections of the manual for their installation.
Chapter 3: System Interface
Refer here for details on the system interface, which includes the functions and
information provided by the control panel on the chassis as well as other LEDs
located throughout the system.
Chapter 4: Standardized Warning Statements
You should thoroughly familiarize yourself with this chapter for a general overview
of safety precautions that should be followed when installing and servicing the
SuperServer 6027R-3RF4+.

SUPERSERVER 6027R-3RF4+ User's Manual
iv
Chapter 5: Advanced Serverboard Setup
Chapter 5 provides detailed information on the X9DR3-LN4F+ serverboard, includ-
ing the locations and functions of connections, headers and jumpers. Refer to this
chapter when adding or removing processors or main memory and when reconfig-
uring the serverboard.
Chapter 6: Advanced Chassis Setup
Refer to Chapter 6 for detailed information on the SC825TQ-R740LPB server chas-
sis. You should follow the procedures given in this chapter when installing, removing
or reconfiguring SAS/SATA or peripheral drives and when replacing system power
supply units and cooling fans.
Chapter 7: BIOS
The BIOS chapter includes an introduction to BIOS and provides detailed informa-
tion on running the CMOS Setup Utility.
Appendix A: BIOS Error Beep Codes
Appendix B: System Specifications

Notes
Preface
v

vi
Table of Contents
Chapter 1 Introduction
1-1 Overview .........................................................................................................1-1
1-2 Serverboard Features..................................................................................... 1-2
Processors ......................................................................................................1-2
Memory ...........................................................................................................1-2
SAS.................................................................................................................1-2
Serial ATA........................................................................................................1-2
PCI Expansion Slots....................................................................................... 1-2
Rear I/O Ports.................................................................................................1-3
1-3 Server Chassis Features ................................................................................1-3
System Power................................................................................................. 1-3
Hard Drive Subsystem.................................................................................... 1-3
Front Control Panel......................................................................................... 1-3
Cooling System............................................................................................... 1-3
1-4 Contacting Supermicro....................................................................................1-5
Chapter 2 Server Installation
2-1 Overview .........................................................................................................2-1
2-2 Unpacking the System.................................................................................... 2-1
2-3 Preparing for Setup......................................................................................... 2-1
Choosing a Setup Location............................................................................. 2-1
2-4 Warnings and Precautions!............................................................................. 2-2
Rack Precautions............................................................................................ 2-2
Server Precautions..........................................................................................2-2
Rack Mounting Considerations.......................................................................2-3
Ambient Operating Temperature................................................................2-3
Reduced Airflow .........................................................................................2-3
Mechanical Loading ................................................................................... 2-3
Circuit Overloading..................................................................................... 2-3
Reliable Ground ......................................................................................... 2-3
2-5 Installing the System into a Rack ...................................................................2-4
Separating the Sections of the Rack Rails.....................................................2-4
Installing the Inner Rail Extension..................................................................2-4
Outer Rack Rails............................................................................................. 2-6
Chapter 3 System Interface
3-1 Overview .........................................................................................................3-1
3-2 Control Panel Buttons..................................................................................... 3-1
SUPERSERVER 6027R-3RF4+ User's Manual

vii
3-3 Control Panel LEDs ........................................................................................3-2
3-4 Drive Carrier LEDs.......................................................................................... 3-3
Chapter 4 Standardized Warning Statements for AC Systems
4-1 About Standardized Warning Statements.......................................................4-1
Warning Definition........................................................................................... 4-1
Installation Instructions.................................................................................... 4-4
Circuit Breaker ................................................................................................ 4-5
Power Disconnection Warning........................................................................ 4-6
Equipment Installation..................................................................................... 4-8
Restricted Area................................................................................................ 4-9
Battery Handling............................................................................................ 4-10
Redundant Power Supplies .......................................................................... 4-12
Backplane Voltage ........................................................................................ 4-13
Comply with Local and National Electrical Codes........................................4-14
Product Disposal........................................................................................... 4-15
Hot Swap Fan Warning................................................................................. 4-16
Power Cable and AC Adapter ...................................................................... 4-18
Chapter 5 Advanced Serverboard Setup
5-1 Handling the Serverboard............................................................................... 5-1
Precautions .....................................................................................................5-1
Unpacking .......................................................................................................5-2
5-2 Serverboard Installation.................................................................................. 5-2
5-3 Connecting Cables.......................................................................................... 5-3
Connecting Data Cables................................................................................. 5-3
Connecting Power Cables .............................................................................. 5-3
Connecting the Control Panel.........................................................................5-3
5-4 Rear I/O Ports.................................................................................................5-4
5-5 Installing the Processor and Heatsink ............................................................5-5
Installing an LGA2011 Processor....................................................................5-5
Installing a Passive CPU Heatsink .................................................................5-8
Removing the Heatsink...................................................................................5-9
5-6 Installing Memory.......................................................................................... 5-10
Memory Support............................................................................................5-10
DIMM Installation .......................................................................................... 5-10
5-7 Adding PCI Add-On Cards............................................................................5-13
5-8 Serverboard Details ...................................................................................... 5-14
X9DR3-LN4F+ Quick Reference...................................................................5-15
5-9 Connector Definitions ...................................................................................5-17
Table of Contents

viii
SUPERSERVER 6027R-3RF4+ User's Manual
5-10 Jumper Settings............................................................................................ 5-24
5-11 Onboard Indicators........................................................................................5-28
5-12 SATA and SAS Ports.....................................................................................5-29
5-12 Installing Software......................................................................................... 5-30
SuperDoctor III..............................................................................................5-31
5-13 Onboard Battery............................................................................................ 5-32
Chapter 6 Advanced Chassis Setup
6-1 Static-Sensitive Devices..................................................................................6-1
Precautions .....................................................................................................6-1
Unpacking .......................................................................................................6-1
6-2 Control Panel .................................................................................................. 6-2
6-3 System Fans................................................................................................... 6-3
System Fan Failure.........................................................................................6-3
Replacing System Fans.................................................................................. 6-3
6-4 Drive Bay Installation/Removal.......................................................................6-4
Accessing the Drive Bays............................................................................... 6-4
SAS/SATA Drive Installation............................................................................ 6-5
Hard Drive Backplane..................................................................................... 6-6
DVD-ROM Installation.....................................................................................6-6
6-5 Power Supply..................................................................................................6-7
Power Supply Failure......................................................................................6-7
Removing/Replacing the Power Supply.......................................................... 6-7
Chapter 7 BIOS
7-1 Introduction...................................................................................................... 7-1
Starting BIOS Setup Utility..............................................................................7-1
How To Change the Configuration Data......................................................... 7-1
Starting the Setup Utility................................................................................. 7-2
7-2 Main Setup...................................................................................................... 7-2
7-3 Advanced Setup Configurations......................................................................7-3
7-3 Event Logs.................................................................................................... 7-23
7-4 IPMI............................................................................................................... 7-25
7-5 Boot............................................................................................................... 7-27
7-6 Security......................................................................................................... 7-28
7-7 Save & Exit................................................................................................... 7-29
Appendix A BIOS Error Beep Codes
Appendix B System Specifications

Chapter 1
Introduction
1-1 Overview
The SuperServer 6027R-3RF4+ is a high-end server comprised of two main subsys-
tems: the SC825TQ-R740LPB 2U chassis and the X9DR3-LN4F+ dual processor
serverboard. Please refer to our web site for information on operating systems that
have been certified for use with the system (www.supermicro.com).
In addition to the serverboard and chassis, various hardware components have
been included with the 6027R-3RF4+, as listed below:
• Two passive CPU heatsinks (SNK-P0048P)
• Three 8-cm system fans (FAN-0126L4)
• One air shroud (MCP-310-29001-0N)
• SAS/SATA Accessories
One SAS/SATA backplane (BPN-SAS-825TQ)
Eight drive carriers (MCP-220-00075-OB)
• One rackmount kit (MCP-290-00053-ON)
• One CD containing drivers and utilities
• SuperServer 6027R-3RF4+ User's Manual
Chapter 1: Introduction
1-1

1-2
SUPERSERVER 6027R-3RF4+ User's Manual
1-2 Serverboard Features
The SuperServer 6027R-3RF4+ is built around the X9DR3-LN4F+, a dual processor
serverboard based on the Intel C600 chipset and designed to provide maximum
performance. Below are the main features of the X9DR3-LN4F+. (See Figure 1-1
for a block diagram of the chipset).
Processors
The X9DR3-LN4F+ supports single or dual Intel® Xeon E5-2600 Series processors.
Please refer to the serverboard description pages on our web site for a complete
listing of supported processors (www.supermicro.com).
Memory
The X9DR3-LN4F+ has 24 DIMM slots that can support up to 768 GB Registered
(RDIMM), Load Reduced (LRDIMM), ECC or Unbuffered ECC/Non-ECC DDR3
800/1066/1333/1600 MHz memory. Use of DDR3-1600 depends on memory con-
figuration. See Chapter 5 for details.
SAS
Atotal of eight SAS ports are provided onboard, which are RAID 0, 1 and 10 capable.
Note: The operating system you use must have RAID support to enable the hot-
swap capability and RAID function of the SAS drives.
Serial ATA
A SATA controller is also integrated into the chipset to provide two SATA 3 (6/Gbps)
and four SATA 2 (3 Gbps) ports, which are RAID 0, 1, 5 and 10 supported. The
SATA drives are hot-swappable units. RAID 5 supported with Windows OS only).
Note: The operating system you use must have RAID support to enable the hot-
swap capability and RAID function of the SATA drives.
PCI Expansion Slots
The X9DR3-LN4F+ has four PCI-E 3.0 x16 slots, one PCI-E 3.0 x8 slot and one
PCI-E 3.0 x4 (in a x8) slot.

1-3
Chapter 1: Introduction
Rear I/O Ports
The color-coded I/O ports include one COM port, a VGA port, four USB 2.0 ports
(additional USB headers are included on the serverboard) and four gigabit Ethernet
ports. A dedicated IPMI LAN port is also included.
1-3 Server Chassis Features
The SC825TQ-R740LPB is an ATX form factor chassis designed to be used in a
2U rackmount configuration. The following is a general outline of the main features
of the SC825TQ-R740LPB server chassis.
System Power
The SC825TQ-R740LPB features a redundant 740W power supply composed of
two separate power modules. This power redundancy feature allows you to replace
a failed power supply module without shutting down the system.
Hard Drive Subsystem
The SC825TQ-R740LPB chassis was designed to support eight hot-swap SATA
or SAS hard drives.
Front Control Panel
The control panel on the SC825TQ-R740LPB provides you with system monitoring
and control. LEDs indicate system power, HDD activity, network activity, system
information and power supply failure. A main power button and a system reset but-
ton are also included. In addition, two USB ports have been incorporated into the
control panel to provide front side USB access.
Cooling System
The SC825TQ-R740LPB chassis has an innovative cooling design that includes
three 8-cm hot-plug system cooling fans located in the middle section of the chas-
sis. An air shroud channels the airflow from the system fans to efficiently cool the
processor area of the system. The power supply module also includes a cooling fan.

1-4
SUPERSERVER 6027R-3RF4+ User's Manual
Figure 1-1. Intel C600 Chipset:
System Block Diagram
Note: This is a general block diagram. Please see Chapter 5 for details.

1-5
Chapter 1: Introduction
1-4 Contacting Supermicro
Headquarters
Address: Super Micro Computer, Inc.
980 Rock Ave.
San Jose, CA 95131 U.S.A.
Tel: [phone]
Fax: [phone]
Email: [email protected] (General Information)
[email protected] (Technical Support)
Web Site: www.supermicro.com
Europe
Address: Super Micro Computer B.V.
Het Sterrenbeeld 28, 5215 ML
's-Hertogenbosch, The Netherlands
Tel: [phone]
Fax: [phone]
Email: [email protected] (General Information)
[email protected] (Technical Support)
[email protected] (Customer Support)
Asia-Pacific
Address: Super Micro Computer, Inc.
3F, No. 150, Jian 1st Rd.
Zhonghe Dist., New Taipei City 23511
Taiwan (R.O.C)
Tel: [phone]
Fax: [phone]
Web Site: www.supermicro.com.tw
Technical Support:
Email: [email protected]
Tel: [phone]

1-6
SUPERSERVER 6027R-3RF4+ User's Manual
Notes

Chapter 2: Server Installation
2-1
Chapter 2
Server Installation
2-1 Overview
This chapter provides a quick setup checklist to get your SuperServer 6027R-3RF4+
up and running. Following these steps in the order given should enable you to have
the system operational within a minimum amount of time. This quick setup assumes
that your system has come to you with the processors and memory preinstalled. If
your system is not already fully integrated with a serverboard, processors, system
memory etc., please turn to the chapter or section noted in each step for details on
installing specific components.
2-2 Unpacking the System
You should inspect the box the SuperServer 6027R-3RF4+ was shipped in and note
if it was damaged in any way. If the server itself shows damage you should file a
damage claim with the carrier who delivered it.
Decide on a suitable location for the rack unit that will hold the SuperServer 6027R-
3RF4+. It should be situated in a clean, dust-free area that is well ventilated. Avoid
areas where heat, electrical noise and electromagnetic fields are generated. You
will also need it placed near a grounded power outlet. Read the Rack and Server
Precautions in the next section.
2-3 Preparing for Setup
The box the SuperServer 6027R-3RF4+ was shipped in should include two sets of
rail assemblies, two rail mounting brackets and the mounting screws you will need to
install the system into the rack. Follow the steps in the order given to complete the
installation process in a minimum amount of time. Please read this section in its en-
tirety before you begin the installation procedure outlined in the sections that follow.
Choosing a Setup Location
• Leave enough clearance in front of the rack to enable you to open the front door
completely (~25 inches) and approximately 30 inches of clearance in the back
of the rack to allow for sufficient airflow and ease in servicing.

2-2
SUPERSERVER 6027R-3RF4+ User's Manual
• This product is for installation only in a Restricted Access Location (dedicated
equipment rooms, service closets and the like).
• This product is not suitable for use with visual display work place devices
acccording to §2 of the the German Ordinance for Work with Visual Display Units.
2-4 Warnings and Precautions!
Rack Precautions
• Ensure that the leveling jacks on the bottom of the rack are fully extended to
the floor with the full weight of the rack resting on them.
• In single rack installation, stabilizers should be attached to the rack. In multiple
rack installations, the racks should be coupled together.
• Always make sure the rack is stable before extending a component from the
rack.
• You should extend only one component at a time - extending two or more si-
multaneously may cause the rack to become unstable.
Server Precautions
• Review the electrical and general safety precautions in Chapter 4.
• Determine the placement of each component in the rack before you install the
rails.
• Install the heaviest server components on the bottom of the rack first, and then
work up.
• Use a regulating uninterruptible power supply (UPS) to protect the server from
power surges, voltage spikes and to keep your system operating in case of a
power failure.
• Allow any hot plug drives and power supply modules to cool before touching
them.
• Always keep the rack's front door and all panels and components on the servers
closed when not servicing to maintain proper cooling.

Chapter 2: Server Installation
2-3
Rack Mounting Considerations
Ambient Operating Temperature
If installed in a closed or multi-unit rack assembly, the ambient operating tempera-
ture of the rack environment may be greater than the ambient temperature of the
room. Therefore, consideration should be given to installing the equipment in an
environment compatible with the manufacturer’s maximum rated ambient tempera-
ture (Tmra).
Reduced Airflow
Equipment should be mounted into a rack so that the amount of airflow required
for safe operation is not compromised.
Mechanical Loading
Equipment should be mounted into a rack so that a hazardous condition does not
arise due to uneven mechanical loading.
Circuit Overloading
Consideration should be given to the connection of the equipment to the power
supply circuitry and the effect that any possible overloading of circuits might have
on overcurrent protection and power supply wiring. Appropriate consideration of
equipment nameplate ratings should be used when addressing this concern.
Reliable Ground
A reliable ground must be maintained at all times. To ensure this, the rack itself
should be grounded. Particular attention should be given to power supply connec-
tions other than the direct connections to the branch circuit (i.e. the use of power
strips, etc.).
Warning! To prevent bodily injury when mounting or servicing this unit in a
rack, you must take special precautions to ensure that the system remains
stable. The following guidelines are provided to ensure your safety:
• This unit should be mounted at the bottom of the rack if it is the only unit in
the rack.
• When mounting this unit in a partially filled rack, load the rack from the bottom
to the top with the heaviest component at the bottom of the rack.
• If the rack is provided with stabilizing devices, install the stabilizers before
mounting or servicing the unit in the rack.

2-4
SUPERSERVER 6027R-3RF4+ User's Manual
2-5 Installing the System into a Rack
This section provides information on installing the SC825 chassis into a rack unit
with the quick-release rails provided. There are a variety of rack units on the market,
which may mean the assembly procedure will differ slightly. You should also refer to
the installation instructions that came with the rack unit you are using.
Note: This rail will fit a rack between 26" and 33.5" deep.
Separating the Sections of the Rack Rails
The chassis package includes two rail assemblies in the rack mounting kit. Each
assembly consists of two sections: an inner fixed chassis rail that secures directly
to the server chassis and an outer fixed rack rail that secures directly to the rack
itself.
Installing the Inner Rail Extension
The SC825 chassis includes a set of inner rails in two sections: inner rails and
inner rail extensions. Inner rail extensions are attached to the inner rails to mount
the chassis in the rack.
Installing the Inner Rails
1. Place the inner rail extensions on the side of the chassis aligning the hooks
of the chassis with the rail extension holes. Make sure the extension faces
"outward" just like the pre-attached inner rail.
2. Slide the extension toward the front of the chassis.
3. Secure the chassis with 2 screws as illustrated. Repeat steps for the other
inner rail extension.

Chapter 2: Server Installation
2-5
Figure 2-1: Separating the Rack Rails
1
1
1
2
1
4
1
3
Separating the Inner and Outer Rails
1. Locate the rail assembly in the chassis
packaging.
2. Extend the rail assembly by pulling it
outward.
3. Press the quick-release tab.
4. Separate the inner rail extension from
the outer rail assembly.
Rail Assembly
Extending the Rails
Quick-
Release Tab
Separating
the Inner Rail
Extension
Warning: do not pick up the server with the front handles. They are de-
signed to pull the system from a rack only.

2-6
SUPERSERVER 6027R-3RF4+ User's Manual
Outer Rack Rails
Outer rails attach to the rack and hold the chassis in place. The outer rails for the
SC825 chassis extend between 30 inches and 33 inches.
Installing the Outer Rails to the Rack
1. Secure the back end of the outer rail to the rack, using the screws provided.
2. Press the button where the two outer rails are joined to retract the smaller
outer rail.
3. Hang the hooks of the rails onto the rack holes and if desired, use screws to
secure the front of the outer rail onto the rack.
4. Repeat steps 1-3 for the remaining outer rail.
Figure 2-2. Assembling the Outer Rails
1
1
1
2
1
3