TURNER DESIGN AQUAFLUOR User manual

Handheld Fluorometer and Turbidimeter
User's Manual
Dated: 3/08/0I
Version.
1.1
PIN 998·0851
TURNER
OESIGNS
815 W
MadIA-..
.Si.rny4IIt.
CA
9Ql5
IQ}
148-01194
•
FAX
(4OlI)
1G01118
-
-~
·
"b"1.an...l
1
6..f1()t!l

TableofConten
ts
I.
Int
ro
duction
1.1 De
sc
ri
ption ........................................
..
....... 4
1.2
In
s
pe
ction a
nd
Setup ..........
..
..
..
..................4
I.J Genern
ll
nfomlation and Precautions .......... 5
2.
Quick
Vi
ew
Dira
g
rram
s .......
....
..
..
...........
..
...........6
J. Ins
trum
ent Pnr.
:un
ete
rs
3.
1 Fiml\vare Ao
wc
han ..................................... S
32
In
strume
nt
Power Up .................
..
.............. 10
33
Au
orescence or Tu
rbi
dity Channel
..
.........
10
3
.4
CalibrationStandard
Va
lu
e ...................
..
... 10
3.5
Calib
ra
t
ion
..................................
..
...........
..
10
.
l6
Sample Anal
ys
is ...........
...
...
..
..
.................
..
II
3.7
Imemal
Dat
a Logging (IDL) ...........
..
.........
11
3
.7.
1
Ac
tiva
te
Data Logg
in
g ................ 12
3.7
.2 Download Data .............
....
.......... 12
3.
7
.3
Er
ase Data ...................................
12
3.8
Di
agnos
ti
c In
fo
m
la
ti
on .............................. 12
4. Gen
era
lConsiderntions
fo
r Analys
is
4
.1
Handli
ng
Samples ...................................... IJ
4.2
Linear
Ra
nge
a
nd
Quenc
hi
ng .................... IJ
43
Te
mpera
lU
re
Considerations...................... 15
4.4
Positio
nin
g Samples .................................. 15
45
Da
taQu
al
it
y...................................
....
......
..
15
5. Warranty
5.
1 Tenns
....
...
................................................. 16
52
Warra
nt
y Service ....................................... 17
53
Out
of
Wam
my Service ............................ 18
Aq
ll
(f
fl
uorn!
Use
r's Manual 2

A
pp
endices:
A.
Ins
trum
ent SI
)e<!
ilicotions
A I. GeneralSpec
ifi
c:uions ..................
..
.
....
..... 19
A1. Optical and Application Specifications ..... 19
D. Inte
rna
l
00
10 Logging
BI. Shipping Check
li
st ................................
....
:D
B
:!.
Ha
rd
ware Requirements ...........................
..
J)
B
J.
In
stall:
lIi
on .........
...
....
..
.........
..
....
..
..
......
......
])
B-'. Connecting ......
..
..
.......
..
..................
..
.........
J)
B
5.
Real Time
DaHl
Transfer .............................
21
B6.
ID
L
Tr
oublesh
oo
ting ...............................
..
:!?:
C.
I
II
\'iI'oC
hl
oro
phy
ll
..
.......................................
23
Aq
//
(/
flu
o
rT\!
Use
r'
s
/l.
la
flu
al 3
I. Inll-oduc
ti
on
1.1
Description
TheAqllofluo
rn.!
is adual-channel mini
flu
oromet
er
designed for quick.
eas
y and aecum!e
nu
o
rc
sc
e~ce
and turbidity m
ea
surements. When properly cahbmted
wi
th
a standard
of
kn
own concentration.
th
e
Aqllofluorn.!
di
splays
th
e actual
co
ncentmtion of the
compound.
1.
2
In
spec
ti
on and Setup
•
•
•
•
•
1.2.1
Inspection
Upon receiving your instrumem. please inspect.
everything carefully and make sure all accesso
nc
s arc
presen
t.
A
ll
shipments include:
TheAqllofluor™
The
User's
Manual
4 AAA batteries
4 Polystyrene cu
ve
ttes
Storage Pouch
1.2.2
Se
tup
Before
th
e Aqllo
flu
orn.!can
be
used. the supplied
batteries must
be
insta
ll
ed
.
1.
On
the backside of
th
e instrum
ent
. loosen
th
e
SC
TC
\\
and
re
move the baltery panel (see Section 2 for
diagrrun).
2 Install
th
e 4 AAA batteries into
th
e approp
ri
ate space
s.
3. Replace
th
e ba
ll
ery panel and tighten the scre
w.
11le
panel has an o-ring, which creates a watertight seal.
The
battery panel may
be
difficult to install
if
there is no
Aqllafluo
r
T).!
User's
Manual

lubricati
On
on
th
e o
or
i
ng
. Use a silicon based o-
rin
g
grease to lubric:llc the o-ring ir
ne
cess;
lr
y.
13 Gcncr.tllnfonnation and Precautions
•
•
•
•
The sample
co
mpartmc
nt
cannot acccpt glass
or
qualll cu\ctle
s.
A minimum \'olume of
21111s
in
a
lO
x
10
cu
ve
tt
e is
requircd for best results.
Mo
id
ha
vi
ng any :lir bubbles
in
YO
U1
' sample. The}
c:m significantly affect the nuoresccnt rcading.
F
or
beSt
results measuring l
ow
turbidities. use good
polystyrene cu
vc
llC
S(PIN 7000-957). SeeSection
~A
fo
r further infommt
iO
I1
.
Aq
ll
o
nu
ol'nl User's Manual 5
2.
Qu
ick View Dingmllls
1
1.
42
I
"-
3.54
Ba
tt
ery panel
--"
~
Aquo
nu
or™ User's Manual
7.32
6

'-
~)
'
~~
~
II
Aguafluor
eee
@eG
@08
eeel
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Aql
l
ll
nuo
r™
User
's
Man
ual
7
3.
In
strume
nt
P
aram
eters
3.1 Finnware
Flo
wc
han
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ll
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9
Inst
rum
e
nt
Power
Up
To tum
on
th
e A
lflw
rlu
or
™,
press the <
ON
/OFF> b
utt
on, The
inst
ru
me
nt
takes 5 seconds to wann
up
, After
the
\\
anll u
p,
the
Aqllarluor
n.,
is ready foro
per-
lli
on.
Fluo
re
sce
nce orTu
rb
i
di
lYCh:
lI1
l1c
l
Choose
th
e a
pp
ro
pri
ate
cha
nn
el for }o
ur
an
aly
sis. To do thi
s.
press
th
e
<A
lB> b
utt
on to toggle between the 2 c
han
ne
ls,
The ac
ti
v
at
ed
chann
el
wi
ll
be
di
splayed in
th
e lower left comer
of
th
e Home screen.
OlL
RIVT
lRB
=C
hl
oro
phy
ll
=
Rh
oda
min
c \VT
=Tu
rbi
dity
Ca
li
brnti
onStandard
Va
lue
Befo
re
pe
rforming a calib
ra
tion.
se
t the value of your standa
rd
.
P
re
ss the
<S
TO
VAL>
bulton.
Use
th
e
up
and
do
wn
arrows to adjust
th
e sta
nda
rd valu
\!.
H
ol
di
ng
eitherarrow bu
tt
on down
wi
ll
ac
ti
v
at
e fasterscro
ll
ing.
When
fi
ni
shed.
Pre
ss <ESC> or <ENT> to acce
pt
t
he
\'a
lu
c
and
10
re
l
urn
to
th
e Ho
me
screen,
Calibration
Werecommcnd thai
yo
ualwa
ys
calibrnlc befo
re
pe
rfonning
any
sample analysis. A
rt
er Ihe initialcalibr
at
ion.
Ih
e
Aqllarluo
r"
s so
li
d standa
rd
c
an
be
used \0 check
fo
r
in
st
ru
-
ment
drift and
rec
alibrat
io
n.

I. Pre
!;S
Ihe
<CAL>
bU
ll
on.
2.
Press <ENT> 10 s
lanlhc
calibr:nion.
3.
InStil your blank and press <ENT>. TheAqlla
OuorTht
w
ill
alerage
Ihe
nuoresccnce for 10
seco
nd
s.
·t
In
sen I
he
ca
libr:nion s
l<lnd<lrd
and press <E
NT
>.
5.
Prc.
ss
<~NT>
when the calibr:nion is
co
mplclc 10 accept the
c~
lt
bralton.
I
~
<ENT> is not pressed
wi
th
in
10
seconds. you
WII] be asked If you
MIl
ItIO
abon
the calibration. Press the
up or d
ow
n
aITOII
to abon
or
accepllhc
calibr.lIion respec_
tin!'!
y.
If at
all
}time during sleps
I
·
~
you wa
lll
to Stop the calibra-
t
io
n. press <ESC>. This \Ii
ll
retu
rn
you
to
the Home screen
and will default the
in
stnunent 10
th
e prcl'ious
ca
li
bration.
3.6
Sample An31ysis
I.
In
sert your sample.
2.
Pre
ssei
th
cr <READ>
bt
llt
on. The
in
strume
nt
wi
ll
autor:lIlge,
th
en measure and average
th
e
flu
orescen
ce
signal
ol
'er a 5-sccond i
lll
erv
aJ.
3.
The
re
sult
wi
ll
be
di
sp
layed at the top and center
of
the
Home screen.
-t
The t
Op
le
f!
come
r w
ill
di
sp
la
y "WA
IT'
for 5 seco
nd
s.
Once
"WA
l
r'
disappears. another sample reading can be
perfonnt.-d.
3.7
Intemal Data Logging (lOLl
This is an o
p(i
o
nal
fC3lure.
I
flhis
feature has been pur-
chased. yourAqllanuor
nt
can l
og
up
to
I
<XX>
dala points.
The.DATA screens
co
ntrol logg
in
g. d
O\\
lll
oading and
er:lSlIIg the
d3l
a. For further infonnatlon.see Appendix B.
Al/llanU
Ol·™
Uscr's Manual "
3.7.
1 Acth'
31e
Data Logging
I. Press
the:
<D
ATA>
buil
on
2lim
es
.
2.
Press <ENT> to toggle
be
tween logging and stop Statuses.
3.
Press <ESC> when
l'ini
sh
ed
10 return
iO
\he Home screen.
3.7.2 Download Data
I. Connect t
ht!
Aqlt
ll
nuor
Th1
lo the serial
pon
of
)"o
ur computer.
2.
Open
th
e Turner
I:>c:
sign
!>
Inte
rf
ace
So
fl
ware:.
See Appendix
Bf
or
comput
er
requirements and
in
stallation.
3.
Press
the <DATA> button 3 limes.
4.
Press <ENT> 5
ti
mes to !>Imt
l~
dala dow
nl
oad.
5.
Press <ESC> when finished
to
return to the Horne screen.
3.7.3 Erase Data
l.
Pre
S!;
th
e <DATA>
bUllo
n 4 time
S.
2 Press <ENT> 5
ti
m
es
to
erase
lI
lll
ogged dala.
1 Press <ESC> when finished to retul1lto Ihe HO
lli
e screen.
3.8
Diagnos
ti
c Information
I. Press <DlAG> to access
th
e diagn
os
ti
c screens.
2 The first screen shows
lhe
number
of
dam points available
for inte
rn
al
data logging.
3.
Press <ENT> to toggle tOlhe %FS (Full Scale)
va
lues from
the clllibration blank and slandlrd.
4.
Press <ESC> when finished 10
re
turn 10 the Home screen.

4.
Ce
n
era
l
Co
nsi
derations
for
L
T:\h.c
cafe not
10
sp
ill
samples
111\0
the
sample chamber.
Wipe
up
any
spills promptly.
2.
The
Aqllllnuor
nt
is
"cry
sen
si
tive ilnd
e\en
small r
U1l
0unts
of
m:lIcrial
from
:I pre\ i
OliS
s.1m
pl
e
1I13
Y
resuh
in
errors.
Use
a
clean
eU\ene
for all
readings.
Thoro
ugh
and
proper
cleaning of cu
"c
nes between s
ample
readings
is
essential.
and
is
especially important
if
you
an.:
using
the
same
cuvc
tt
e for samples and bl:lllk.
3.
Fililhe e
ll
\ cite alieaSI501'f
full
(1m
ls).Significant
clTO
rcan
res
ult
if
the
cu
ve
ll
e d
oes
not
co
ntain
thi
s
minimulll
vo
lume.
...
The
cu
ve
lle
1\1UST
BE
DR
Yonthe outside when taking
readings.
~Io
i
s
tll
re
and condensmion on the o
ut
side cnn
result
in
error.
5.
Minute bubbles in samples will
ca
u
se
drifting readings.
Take care
nOI
to Introduce bubbles into s:tlllpies. Slight
tapping with
}o
ur finger on the outside cuveue wa
ll
will
III
often help dissipate bubbles.
·t?:
Linear
Ran
ge
a.nd
Quenching
The linenr range is the
co
n
ce
ntration range in \1 hich the rendout
of
the Aql/(/fiuorThI is directly
Il
ropo
ni
ona.lto the
cO
l1
centrmion
of
the fluorollhore.
Th
e lincar range bcgllls with
the
sma
ll
es
t dctectable concentration
and
spa
ns to all
Aqll(lfluor™
U~
r
's
~Iallual
13
"
u
c
"
~
~
o
=>
u:
upper
lim
it
(concemnttioll) thm
is
dependent
upon: the
propenie
s of the
nuore
scent mm
eria
l.
the filters u
sed.
and
the path length.
A nonlinear relrllionship is seen at very high concentrations
where the fluorescence signal d
oes
110(
increase
at
a
co
n-
stant
Nne
in comparison to the ch:
lI1
ge
in
co
ncentratio
n.
At
e\'en
highercon
ce
nu-ations.
nu
orescen
ce
signal will
de-
crease
e\'e
n though
the
sa
mple
co
n
ce
ntrntiO
ll
S are greater.
This effect is known as
"s
ignal
quenching"
.
Linearity may
be
checked by diluting a
sa
mple I:I or
so
me
otherconve
niem r3lio (be sure to use
yo
ur matrix
blank
for
the dilutions). Ifthe
s..
1mple
is
within
the lin
ear
range. the
reading will decrease in direct
proponi
on
to the dilution.
If
the reading does not
de
crease in direct propo
ni
on to the
dilulion
or
if
the rending increases. the s
ample
is
beyond
the
linear
range
of
yo
ur fluorophore.
F1uorophore
cone.
Aqllafluor™
User'
s Manual 14

4.
.3
Tcmpcrnturc Consid.:rntions
Au
or
esc
cnce IStempernturc sens
it
ive. As the tempcrnture of
the
sample
IIl
creascs. the
flu
orescence
de
creases. For t
accuracy.
re
ad blan
k.
standard. and
s.1
mples
allh
e same
lem
pc
l':tturc.
~.4
P
m.
iti
oningSamples
Fo
r 10\\ conce
nt
ration samples. cu
ve
ues o
ft
en w
ill
<Ji
ve
s
li
ghtly diffe
renlm
easurcmc
llI
s depending upon
I
~
i
r
~ n
c
nt
a
ti
o
n
in
Ih
e sample
co
mpartment. This is due 10 defects
In
the shape of the cu\ ette
Ih
m are nOI \ isible to the human
eye.
We
r
eco
mmend that
th
e cu
Ve
li
c be marked
:u
tile
POs
i
t
i
~
lI
:d
in the
5.
1l11p
le compartme
nt
lhe same wayeach
10
11IIIIIIIlI
Ze
error.
We
ha
\e
found thm
tu
rbidity is partic
ul
a
rl
y sensiti
ve
to
th
Is
fa
CIO
I'
.
We
recommend for
be
St
re
sults. us
in
g high quality
pol
ys
tyrene cu
ve
tles
(P
IN 7
000
-9571which showed
li
ttl
e
o
ri
e
nt
ation a
nd
cuveue 10 cu
vc
uc v:mauo
ll
in testina
0 '
~
.5
Data Qualily
Th
e AqulI
nu
orn l is only as a
cc
urate as the standa
rd
s Ihat a
re
used t
oc
ahbrate it. This is why
it
is i
mpon
:lIlt 10 take care
when preparing stand
:l
rd
s. samples. and bla
nk
. One should
follo\\ good laborato
ry
practices
....
hen pfepming all solulions
a
nd
rC
:l
ge
nt
:;.
"
Tume
r
De
signs
watT:l
I1l
S
th
e Aqllufluor
n1
Fluoro
1llet
er a
nd
accesso
ri
es to be free f
ro
m defects in mate
ri
als and
wO
I'kman-
ship u
nd
er
nomlal use and s
er
vice for a period
of
one year
from
th
e time of imti(ll
pUl'
c
h:l
se. with the fo
ll
ow
in
g rest
l'i
c-
tions:
I.
Th
e instrume
nt
an
d a
cces$O
ri
es
mU
SI
be
in
stalkd. po\\ crcd.
and operatcd in complian
ce
wilh Ihe direc
ti
ons in this
dQlla
flu
ortM
U$«
( s Manual and di
re
ctions accompanying
the
nc
cesso
ri
es.
2. Damage incurred
in
shipping is ll2lco\'e
re
d.
3, Damage
re
sulting from mcasuremc
nt
of samples found to
be
in
co
mpatible with the
rn
atc
ri:l
ls used in
th
c sample system is
ll21
co\
'cred.
4, Damage
re
sulting from
co
nt
act wi
th
co
rrosi"e matcrial
so
r
atmos
ph
ere is lliI.l covered.
5. Damage from se.1W
ate
r and olher moder.llcly
cOlTOs
h'c
materials that are not promptly rem
ov
ed
from
th
e instrume
nt
are
I!2l
co
ve
red.
6.
Damnge
cn
used by modi
fi
cation or the instrume
nt
by
th
e
customer is
ll21
covc
re
d.

5.:! \\':ur.mIYSerdCI!
To
obla
lll
sen
ice
during
th
e
\\1a
n
':l
llt
} period.
th
e owner
sh:llltal..e the
fo
ll
o\\
ing
steps:
I.
Wri
te or
ca
ll
the Turner
De
signs
sen
ice depanment and
de~c
nbe
as precisely :IS possible
th
e n:lture
of
the
problem.
2 Carry out minor adjustments
or
tests
:u.
suggested
b}
the
Scn
icc
Depanmen
t.
J If proper perfonn:1nce is not obtained. ship the instru-
ment. prepaid. to Turner
De
sign
s.
\\ilh a statement
of
shippmg c
hat
-ges.
The instrument w
ill
be
repaired and
n!
turned free
of
charge. along with a check
to
co\cr
shippmg charges. for all customers
in
Ihe
contiguous
continental United States.
For customers
oU
ls
id
e
of
Ih
e contiguous continental United
States. and
\\
ho
ha\e
purchased
our
equipment from o
ne
of
our
autho
ri
zed distribu
lOB.
contact
th
e disu'ibut
or.
If you
have purchased
di
rect. contact us.
We
will repair
th
e
instnunent al no charge.
but
we
wi
ll
not pay for shipment.
documentation. etc. These charges
\\
ill
be bitted
at
cost.
NQ.IEl
Under DO condi
ti
ons should the instrument or
accessories be retll
l1l
ed
wi
th
ouillotice.
Pri
or correspon-
dence
is
needed:
a. To ensure that
th
e problem
is
not a
tri
vial one. eas
il
y
handled in your laborator
y.
with consequent
S:I\
ings
to
e\eryone.
b. To specifically detemline the nature
of
the problem.
so that repair can
be
rapid. with panicul:lr allenlion
paid
10
t
he
defect you have n
Oh!u.
Al/llofluorT\t User's Manual
17
5.3
Oll
t-of-Warranty
SeJ"\'ice
Proceed e'(actly
as
for Warmnty
Sen
ice. above. If
our
service depanmellt can assisl you b) phone
or
cOlTespon-
dence. we
wi
ll
be
glad 10.
al
no charge.
Rep3irservice
wi
ll
be billed on a basis
of
time and maleri-
31s.
Acomplele statement
or
time spent and materi:
ll
s used
will
be
sup
pli
ed. Shipment
to
Tumer
Designs should
be
prepaid.
Your
bill
witl
include retum shipment freig
ht
charges.
Address r
orS
hipment:
Turner Designs
8"-5
W.!\laude
A\e.
Sunnyvale. CA
<).U)85
Aqllonuor™ User's M3nual
IS

f\
IJIX=IIUIA
...,.:
lI~lI
'
Umt:1lI
",peC
III
C
~lll
O
l
lS
AI. Gencrnl Specificati
ons
SD«ilictllion Descri lion
Siu
I.7s".'( 3.5".'( 7.25"
(~
A5c01'\8
.9cmx
18
.-k01I
Wdght 13.90z
(OAkg)
Dynamic
r:mge
3orders
of
magnilu<k
Resolution
12
bIts
LCD
Di
sp
la
y 2.
'(
16ch:lr.lCters
c,'"
Meets
IP
67
Standard: dustproof:md
\\
aterproof
Temper:nun!
~1-1~
·
F
:
S...JOOC
I)cteclOr Pholodiodes: m
e3Sure
me
lll
cap3bility from300-IOOOnm
Calibra
ti
on T)
I)I!
Single-paim
and
bl
anl
AI:ums 1.0\\
b::mery.
circuit railure.
Hi
gh
blank
Cuvelle Typt IOmm'(
IOmm
pl
3S
t
ic
Warm
Up
Ti
me
5 seconds
Automatic Po\\er After
90
seconds of inacti\
il~
Donn
A1. Optical and Applic:lIion Specifications
Chlorophy
ll
Rhodamine Turbidity
Channel Ch:umel Channel
L
lgln
SOl
l
rce
Blu
e
LED
Green L
ED
Green
LED
E.~cit:lliQn
-160:
"Olllll
5-Uh-20nrn
S
lhlOnm
o
li
c~
Emi
ssion
>66Sn01
>S7Onm
SIS:IOnm
Oplies
Lnllil
of
Dch
..
'C'
li
on
O.15ug/l
OAppb
O.SNTU
Max
ran
ge
> 800 ppb
>.IDOpp
b
>150
NTU
Temper:nurc
IA'
d e
O.U:!6/"C
NIA
coefficients
Liue
ar
E
xpu
nc
llI
ml
Aqllilfluor
nl
Uscr"s
~
I
a
ntl
a
l
19
III
Apl)endix
B:
Inl
er
mll
Datalogging
BI. Shipp
in
gCheck
li
st
In
stmme
nt
s with intcmal datn logging purchased will also
recei\'e
in
their shipment:
•
Int
erfacecable
Tumer
Designs Spreadsheet Interface Software
(2
disks)
•
Bo
th
of
th
ese
it
ems are necessary for reu
ie\ing
th
e stored
dal3 in the Aqllafluor
nl
..
B2. Hardware Requirements
•
•
•
PC
wi
thWindows 95
or
Intcr
MS Excel5.00rlater
At least I available serial pe
l1
B
3.
In
stallation
I. Exit
a11
Windows program
s.
2
In
sert
Di
sk
I and
mn
the setup program.
3.
TIle
se
tup wizard will install
th
e necessary filt:s.
YOLl
will
be
prompted f
or
Di
sk 2 when necess.'lry.
4.
When the se
tu
p is complete. an icon named
"_T
O
:?
....
will be
found
in
the "'Program
s'"
me
nu
.
5.
Restart your comput
er.
B~
.
Connecting
I. Using
th
e pro\'ided cable. connect the 9
pi
n adapt
er
of
the cable into the :l\'ailable serial
pen
of
your computer.
Aqllofluor™ User's
r.
·lanual
'0

I.
Pl
ug
the opposite cnd
or
the:
cable
ima
the
base
of
the
Alfllafl
uorTM,
2.
Open
MS
Ex
cel 5.0orlater.
3.
Open the
TD?:
spreads
hc<!t
imetface software.
__
4.
Cl
i
ck
o
ill
he
00:<
[0 [he right of the
CO""
1)011 icon [0
.,..
select Ihe app.-oprionc CO!\I poll. This is usua
ll
y
CO!\I
POlt
2.
5.
CUd. on
"$t,
II
"',
The progrnm will
ope
n:1II
E
~cc
l
spre:'ldshcct for daw transfer. The boxes l
ef
t of the
COM pon
and
1\
'15
Ex
c
el
should
bOlh
be
green.
6.
Follow the directions from Sect
ion
3.7 forcolkcting
and d
ow
nloading dala from the
Aqlllln
u
orT~I.
Dala
\
...
il1
automatical ly :tppearil1lhe excel spreadsheet.
BE
SURE[0
sav
e thisdal3 BEFOREclosing the
TD
so
ft
ware.
85
.
Rea
lTime
D:lIa
Trnosfcr
Data c
an
:llso be Ir:tnsfcrrcd
din.'Clty
[0 the
co
mputer after
t:!:lch
reading.
To
do so:
I.
Slopdma
logging (see 3.7. 1)
2 Follow SICpS 1·6
of
84
\0
crate the connection
be
tween lhe Aqu(lnuor
nl
and your computer.
3.
Insert a sample and press
th
e
<READ>
bUllon. The
re
su
lt
s will automatically tr.\nsfer to the acti\'c Excel
spreadsheet.
Aqllanuor™ U
ser's
Manual 21
..
B.6 IDLTroublesh
oo
ting
Difficulties C:1Il arise
when
p:U1ltlle
tcrs arc sct incolTeclly o.
co
nn
ections with
t
~ cable are not tight enoug
h.
Here are
somecommon problems.
I. Box to the left
of
the
COM
pon
is red. This means
Ihallhe
CO)'.'. port is nO
lavai
lable. Causes:
a.
Another instrument
or
program (such as palm
p
il
otl hot sync) could be occupying the
pon.
making
it
unavailable.
t-.hJ..e
sure to close a\l
programs
of
this type before downloading
da
ta
b.
The
pol1
selected is incorrect. Follow
step
~
of
connecting to
choose
anClller COJ\I
pon
.
2.
A
ll
lights are green. but no
da
ta transfen-ed.
e\e
n though
t
he
instrument
says
"A
ll
data d
ow
nl
oa
ded"
.
a.
The connection between the instrument and the
computer is bad.
Check
and tighten the cable
connections. Make sure both ends of t
he
cable
are plugged
in
tightly.

A
ppendi
x C:
I"
Vil'O
Chlorophy
ll
The detection
of
ill
I'il'O
chlorophy
ll
a is by Ilmurc. a
qualitati\e
measurement.
Ph
ysiologic
al
.
en\
ironmental.
morphological. and temporal factors att cOntribu
te
to the
variation between the il/
dl'o
signal and
th
e actual chloro-
phy
ll
(1
co
nc~rurati
o
n
of a sample.
Ph
ysiol
og
ic
:'!1
effects stem
from
th..::
change in nuorescence per unit chlorophy
ll
of ce
ll
s
at varying physiological states. On a basic l
e\e
l.:'!n '
un
-
health
y'
ce
ll
w
ill
nuo
re
sce more
thM
a 'healthy . cell due to
the
li
ght ener
gy
nbsorbed is channeled into photosynthesi
s.
H
o\~ev
er.
in nmural a
sSt!
mblages
of
phytoplanklon. there is
n
om
larty a
mi
x of species at val) ing degrees
of
he
alth. thus
averaging oUilhe
ph
ysiologi
c!!
!effecl.
Environmental
effeclsderi\e
fr
om mainly I
WO
factors: light
and temperalure. The
li
g
ht hi
story of an algal populmion
wi
ll
aff
ect nuorescence of
li
ving cells. Cells
in
a darkerenviron-
ment will nuoresce more
perunil
chlorophy
ll
than cells
in
a
\'-e
ll
lit zone of the wmercolumn. One way
of
reducing the
eff~cts
of
li
ght is 10 ··darl.. adapt"· yo
ur
sample before
analyzing it.
T~mpernlure
effects :1rC
di
scussed in section
4.3 of Ihe manual. For beSt sample analysis. all samples a
nd
calibration solutions should be measured at the same
temperature.
TempomllSpatial effects a
re
mainly due to differences in
quantum efficiency :lnd ce
ll
size between different species of
ph
ytoplanktOll and photosynthetic bacteria.
Int
er
fering compounds in natural watel
"$
deli\c
from
sc\ern
l
so
ur
ce
s.
The mo
:.
t
commo
n interfering compou
nd
s include
pheophYlin
s.
c
hl
orophy
ll
band
c.
di
sso
lv
ed
or
ga
ni
c matter
and nuorometer. Optical filters \\ ith a wider bandpass
wi
ll
A
ql/{l
nuor
nr
User
's
I\lanual
be susceptible to mo
re
interference than filte
rs
wuh a narrower
bandpa
ss.
In
s
pi
te
of
Ihese concerns. this
d
~s
not mean
th
at actual .
chlorophyll concenlr:ltions
c:\l
m
OI
~
e~tra~laled
frolllthe /1/
1'i1'0 daw. A simple way of c
on
'c!aung
III
1'/1'0
data,
to
~c
t
ual
chlorophyll concentr:ltions is accomplish
ed
by
~nodl
ca
ll
y
collecting "grob" sampl
es
for chlorophyll extraction, Sc\'eral
samples should
be
collect
ed
\\ ithin each niche or
cn\
ironment.
AI
me time
of
collec
ti
on.
th
e inl'iI'O value must
be
noted.
Once
the c
hl
orophy
ll
concentration
ha
s been
detcnnined
~hrough
extr:lction. the concentration should be correlated Wllh
Ih
e
corresponding
ill
1';1
'0
value (see Graph C IJ
GrnphCI
For detailed information on c
hl
orophy
ll
anatysis. pka5e
~
ehe
reference
li
st below or
visi
t
the
Turner
De
signs \\Cbp
3ge
m
w
....
y.
OuolJlmeter
cQm
Aqllonuor™ User's Manual 24
Table of contents