Gigabyte G481-S80 User manual

G481-S80
Dual LGA3647 Sockets Motherboard for Intel® Xeon® Processor Scalable Family Processors
User Manual
Rev. 1.1

Copyright
© 2019 GIGA-BYTE TECHNOLOGY CO., LTD. All rights reserved.
The trademarks mentioned in this manual are legally registered to their respective owners.
Disclaimer
Information in this manual is protected by copyright laws and is the property of GIGABYTE.
Changes to the specications and features in this manual may be made by GIGABYTE without
prior notice. No part of this manual may be reproduced, copied, translated, transmitted, or
published in any form or by any means without GIGABYTE's prior written permission.
Documentation Classications
In order to assist in the use of this product, GIGABYTE provides the following types of documentation:
 User Manual: detailed information & steps about the installation, conguration and use of this
product (e.g. motherboard, server barebones), covering hardware and BIOS.

User Guide: detailed information about the installation & use of an add-on hardware or
software component (e.g. BMC rmware, rail-kit) compatible with this product.
Quick Installation Guide: a short guide with visual diagrams that you can reference easily for
installation purposes of this product (e.g. motherboard, server barebones).
Please see the support section of the online product page to check the current availability of these
documents.
For More Information
For related product specications, the latest rmware and software, and other information please visit our website at
http://www.gigabyte.com
For GIGABYTE distributors and resellers, additional sales & marketing materials are available from our reseller
portal: http://reseller.b2b.gigabyte.com
For further technical assistance, please contact your GIGABYTE representative or visit
https://esupport.gigabyte.com/ to create a new support ticket
For any general sales or marketing enquiries, you may also message GIGABYTE server directly by email:
server[email protected]

Conventions
The following conventions are used in this user's guide:
NOTE!
Gives bits and pieces of additional
information related to the current topic.
CAUTION!
Gives precautionary measures to
avoid possible hardware or software problems.
WARNING!
Alerts you to any damage that might
result from doing or not doing specic actions.

Server Warnings and Cautions
Before installing a server, be sure that you understand the following warnings and cautions.
WARNING!
To reduce the risk of electric shock or damage to the equipment:
• Do not disable the power cord grounding plug. The grounding plug is an important safety
feature.
• Plug the power cord into a grounded (earthed) electrical outlet that is easily accessible at all
times.
• Unplug the power cord from the power supply to disconnect power to the equipment.
• Do not route the power cord where it can be walked on or pinched by items placed against it.
Pay particular attention to the plug, electrical outlet, and the point where the cord extends from
the server.
WARNING!
To reduce the risk of personal injury from hot surfaces, allow the drives
and the internal system components to cool before touching them.
WARNING!
This server is equipped with high speed fans. Keep away from hazardous
moving fan blades during servicing.
CAUTION!
• Do not operate the server for long periods with the access panel open or removed. Operat-
ing the server in this manner results in improper airow and improper cooling that can lead to
thermal damage.
• Danger of explosion if battery is incorrectly replaced.
• Replace only with the same or equivalent type recommended by the manufacturer.
• Dispose of used batteries according to the manufacturer’s instructions.

Electrostatic Discharge (ESD)
CAUTION!
ESD CAN DAMAGE DRIVES, BOARDS, AND OTHER PARTS. WE RECOMMEND THAT YOU
PERFORM ALL PROCEDURES AT AN ESD WORKSTATION. IF ONE IS NOT AVAILABLE,
PROVIDE SOME ESD PROTECTION BY WEARING AN ANTI-STATIC WRIST STRAP AT-
TACHED TO CHASSIS GROUND -- ANY UNPAINTED METAL SURFACE -- ON YOUR SERVER
WHEN HANDLING PARTS.
Always handle boards carefully. They can be extremely sensitive to ESD. Hold boards only by
their edges without any component and pin touching. After removing a board from its protective
wrapper or from the system, place the board component side up on a grounded, static free sur-
face. Use a conductive foam pad if available but not the board wrapper. Do not slide board over
any surface.
System power on/off: To remove power from system, you must remove the system from
rack. Make sure the system is removed from the rack before opening the chassis, adding, or
removing any non hot-plug components.
Hazardous conditions, devices and cables: Hazardous electrical conditions may be
present on power, telephone, and communication cables. Turn off the system and disconnect the
cables attached to the system before servicing it. Otherwise, personal injury or equipment dam-
age can result.
Electrostatic discharge (ESD) and ESD protection: ESD can damage drives,
boards, and other parts. We recommend that you perform all procedures in this chapter only at
an ESD workstation. If one is not available, provide some ESD protection by wearing an antistatic
wrist strap attached to chassis ground (any unpainted metal surface on the server) when handling
parts.
ESD and handling boards: Always handle boards carefully. They can be extremely
sensitive to electrostatic discharge (ESD). Hold boards only by their edges. After removing a
board from its protective wrapper or from the system, place the board component side up on a
grounded, static free surface. Use a conductive foam pad if available but not the board wrapper.
Do not slide board over any surface.
Installing or removing jumpers: A jumper is a small plastic encased conductor that slips
over two jumper pins. Some jumpers have a small tab on top that can be gripped with ngertips
or with a pair of ne needle nosed pliers. If the jumpers do not have such a tab, take care when
using needle nosed pliers to remove or install a jumper; grip the narrow sides of the jumper with
the pliers, never the wide sides. Gripping the wide sides can dam-age the contacts inside the
jumper, causing intermittent problems with the function con-trolled by that jumper. Take care to
grip with, but not squeeze, the pliers or other tool used to remove a jumper, or the pins on the
board may bend or break.

CAUTION!
Risk of explosion if battery is replaced incorrectly or with an incorrect type. Replace the battery
only with the same or equivalent type recommended by the manufacturer. Dispose of used bat-
teries according to the manufacturer’s instructions.

- 7 -
Table of Contents
Chapter 1 Hardware Installation ................................................................................... 11
1-1 Installation Precautions.................................................................................. 11
1-2 Product Specications.................................................................................... 12
1-3 System Block Diagram................................................................................... 15
1-4 NV Link Diagram............................................................................................ 15
Chapter 2 System Appearance.....................................................................................17
2-1 Front View...................................................................................................... 17
2-2 Rear View....................................................................................................... 18
2-3 Front Panel Buttons and LEDs....................................................................... 19
2-4 Front System LAN LEDs................................................................................ 20
2-5 Rear System LAN LEDs................................................................................. 20
2-6 Power Supply Unit (PSU) LED....................................................................... 21
2-7 Hard Disk Drive LEDs .................................................................................... 21
2-8 Memory Status LED....................................................................................... 22
Chapter 3 System Hardware Installation ......................................................................23
3-1 Removing the Top Rear Cover....................................................................... 24
3-2 Removing and Installing the Air Duct ............................................................. 25
3-3 Installing the CPU and Heatsink .................................................................... 26
3-4 Installing the Memory..................................................................................... 28
3-4-1 Six Channel Memory Conguration........................................................................28
3-4-2 Installing a Memory ...............................................................................................29
3-4-3 DIMM Population Rule............................................................................................29
3-4-4 DIMM Population Table .........................................................................................30
3-4-5 Intel Optane DCPMM DIMM Population Rule ........................................................31
3-5 Installing the GPU Card (SXM2 Card) and Heatsink ..................................... 32
3-6 Installing the LAN Card (PCIe x16 Card) ....................................................... 37
3-7 Installing the 2.5" Hard Disk Drive.................................................................. 38
3-8 Replacing the System FAN Module ............................................................... 39
3-9 Removing the Top Front Cover ...................................................................... 40
3-10 Replacing the Power Supply.......................................................................... 41
3-11 Replacing the LAN Module ............................................................................ 42
3-12 Installing the OCP Card (Optional)................................................................. 43
3-13 Cable Connections......................................................................................... 45
3-13-1 Motherboard to SXM2 Board..................................................................................45

- 8 -
3-13-2 Motherboard to 2.5" HDD Backplane Board...........................................................46
3-13-3 Motherboard to Power Board .................................................................................47
3-13-4 SXM2 Board to Power Board .................................................................................48
Chapter 4 Motherboard Components ...........................................................................49
4-1 Motherboard Components ............................................................................. 49
4-2 Jumper Settings ............................................................................................ 50
Chapter 5 BIOS Setup ..................................................................................................51
5-1 The Main Menu .............................................................................................. 53
5-2 Advanced Menu ............................................................................................. 56
5-2-1 iSCSI Conguration ................................................................................................57
5-2-2 Intel(R) Virtual RAID on CPU .................................................................................58
5-2-3 Intel(R) I350 Gigabit Network Connection..............................................................59
5-2-4 VLAN Conguration................................................................................................61
5-2-5 Intel(R) Omni-Path HFI 100 Series.........................................................................64
5-2-6 Intel(R) Ethernet Controller X550 ...........................................................................66
5-2-7 LSI SAS3 MPT Controller SAS3008.......................................................................68
5-2-8 Trusted Computing .................................................................................................69
5-2-9 Serial Port Console Redirection .............................................................................70
5-2-10 SIO Conguration...................................................................................................73
5-2-11 PCI Subsystem Settings.........................................................................................74
5-2-12 Network Stack Conguration..................................................................................76
5-2-13 Post Report Conguration ......................................................................................77
5-2-14 NVMe Conguration ...............................................................................................78
5-2-15 USB Conguration..................................................................................................79
5-2-16 Chipset Conguration.............................................................................................80
5-3 Chipset Setup Menu....................................................................................... 81
5-3-1 Processor Conguration .........................................................................................82
5-3-2 Common RefCode Conguration ...........................................................................84
5-3-3 UPI Conguration ...................................................................................................85
5-3-4 Memory Conguration ............................................................................................86
5-3-5 IIO Conguration ....................................................................................................88
5-3-6 Advanced Power Management Conguration ........................................................90
5-3-7 PCH Conguration .................................................................................................93
5-3-8 Miscellaneous Conguration ..................................................................................95
5-3-9 Server ME Conguration ........................................................................................96
5-3-10 Runtime Error Logging ...........................................................................................97
5-3-11 Power Policy...........................................................................................................99
5-4 Server Management Menu........................................................................... 101
5-4-1 System Event Log ................................................................................................103
5-4-2 View FRU Information ..........................................................................................104

- 9 -
5-4-3 BMC VLAN Conguration.....................................................................................105
5-4-4 BMC Network Conguration .................................................................................106
5-4-5 IPv6 BMC Network Conguration.........................................................................107
5-5 Security Menu .............................................................................................. 108
5-5-1 Secure Boot .........................................................................................................109
5-6 Boot Menu.....................................................................................................111
5-6-1 UEFI NETWORK Drive BBS Priorities ................................................................113
5-6-2 UEFI Application Boot Priorities ................................................................. 114
5-7 Save & Exit Menu......................................................................................... 115
5-8 BIOS POST Codes ...................................................................................... 117
5-8-1 AMI Standard - PEI...............................................................................................117
5-8-2 AMI Standard - DXE.............................................................................................117
5-8-3 AMI Standard - ERROR .......................................................................................119
5-8-4 Intel UPI POST Codes..........................................................................................120
5-8-5 Intel UPI Error Codes ...........................................................................................120
5-8-6 Intel MRC POST Codes .......................................................................................121
5-8-7 Intel MRC Error Codes .........................................................................................121
5-8-8 Intel PM POST Codes ..........................................................................................122
5-8-9 Intel PM POST Codes ..........................................................................................122
5-9 BIOS POST Beep code (AMI standard)....................................................... 123
5-9-1 PEI Beep Codes...................................................................................................123
5-9-2 DXE Beep Codes .................................................................................................123
5-10 BIOS Recovery Instruction........................................................................... 124

- 10 -
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- 11 - Hardware Installation
1-1 Installation Precautions
The motherboard/system contain numerous delicate electronic circuits and components which
can become damaged as a result of electrostatic discharge (ESD). Prior to installation, carefully
read the service guide and follow these procedures:
• Prior to installation, do not remove or break motherboard S/N (Serial Number) sticker or
warranty sticker provided by your dealer. These stickers are required for warranty validation.
• Always remove the AC power by unplugging the power cord from the power outlet before
installing or removing the motherboard or other hardware components.
• When connecting hardware components to the internal connectors on the motherboard,
make sure they are connected tightly and securely.
• When handling the motherboard, avoid touching any metal leads or connectors.
• It is best to wear an electrostatic discharge (ESD) wrist strap when handling electronic
components such as a motherboard, CPU or memory. If you do not have an ESD wrist
strap, keep your hands dry and rst touch a metal object to eliminate static electricity.
•
Prior to installing the motherboard, please have it on top of an antistatic pad or within an
electrostatic shielding container.
• Before unplugging the power supply cable from the motherboard, make sure the power
supply has been turned off.
• Before turning on the power, make sure the power supply voltage has been set according to
the local voltage standard.
• Before using the product, please verify that all cables and power connectors of your
hardware components are connected.
• To prevent damage to the motherboard, do not allow screws to come in contact with the
motherboard circuit or its components.
• Make sure there are no leftover screws or metal components placed on the motherboard or
within the computer casing.
• Do not place the computer system on an uneven surface
.
• Do not place the computer system in a high-temperature environment.
• Turning on the computer power during the installation process can lead to damage to
system components as well as physical harm to the user.
• If you are uncertain about any installation steps or have a problem related to the use of the
product, please consult a certied computer technician.
Chapter 1 Hardware Installation

Hardware Installation - 12 -
1-2 Product Specications
CPU 2nd Generation Intel® Xeon® Scalable and Intel® Xeon® Scalable Processors
Intel® Xeon® Platinum Processor, Intel® Xeon® Gold Processor, Intel® Xeon®
Silver Processor and Intel® Xeon® Bronze Processor
NOTE: If only 1 CPU is installed, some PCIe or memory functions might be
unavailable.
Socket 2 x LGA 3647
Socket P0
Mounting pitch: Narrow ILM
TDP up to 205W
Chipset Intel® C621 Express Chipset
Memory 24 x DIMM slots
DDR4 memory supported only
6-channel memory architecture
RDIMM modules up to 32GB supported
LRDIMM modules up to 64GB supported
Support Intel® Optane™ DC Persistent Memory
1.2V modules: 2933 (1DPC)/2666/2400/2133 MHz
NOTE:
1. 2933MHz for 2nd Generation Intel® Xeon® Scalable Processors only
2. Intel® Optane™ DC Persistent Memory for 2nd Generation Intel® Xeon®
Scalable Processors only
LAN Rear Side:
1 x 10/100/1000 management LAN
Front Side:
2 x 1Gb/s BASE-T LAN port (Intel® I350-AM2)
1 x 10/100/1000 management LAN
4 x QSFP28 LAN port with Intel® Omni-Path Host Fabric Interface (optional)
- 25Gb/s bandwidth per port, total 100Gb/s bandwidth with 4 QSFP28 ports
NOTE: Please select Intel® Xeon processors with Omni-Path Architecture to
enable Intel® Omni-Path Host Fabric Interface
Expansion Slot 8 x SXM2 socket (Gen3 x8 bus) for NVIDIA Tesla® V100/P100 SXM2 module
Rear Side:
4 x PCIe x16 (Gen3 x16 bus) half-length low-prole slot
1 x OCP mezzanine slot
- PCIe Gen3 x8
- Type1, P1, P2, P3, P4, K2, K3
Front Side:
1 x PCIe x16 (Gen3 x8 bus) half-length low-prole slot
Video Integrated in Aspeed® AST2500
2D Video Graphic Adapter with PCIe bus interface
1920x1200@60Hz 32bpp, DDR4 SDRAM

- 13 - Hardware Installation
Storage 10 x 2.5" hot-swappable HDD/SSD bay
- 2 x amber HDD tray compatible with NVMe devices only
- 2 x amber HDD tray compatible with NVMe, SATA/SAS devices
- 6 x blue HDD tray compatible with SATA/SAS devices only
NOTE: SAS card is required to enable the SAS devices support.
SATA Supported
RAID SATA/SAS drives:
Intel® SATA RAID 0/1/5/10
NVMe drives:
Intel® Virtual RAID On CPU (VROC) RAID 0, 1, 5
NOTE: VROC module is compatible with Intel® SSD only.
Internal I/O 1 x TPM header
1 x VROC connector
1 x Front VGA header
1 x Serial header
12 x System fan connector (23000rpm)
Front Panel
LED/Button/
Port/Connector
2 x USB3.0 port
1 x VGA connector
3 x RJ45 LAN connector with LED
4 x Omni-Path QSFP28 LAN port (reserved)
1 x Power button with LED
1 x ID button with LED
1 x Reset button
1 x NMI button
1 x System status LED
1 x HDD access LED
1 x Omni-Path activity LED
Rear Panel
LED/Button/
Port/Connector
1 x MLAN (reserved, enabled by cable switch)
Backplane I/O 2 x port compatible with NVMe only
2 x hybrid port compatible with NVMe and SATA/SAS
6 x port compatible with SATA/SAS only
TPM 1 x TPM header
TPM2.0 kit: CTM010 (optional)

Hardware Installation - 14 -
System
Management
Aspeed® AST2500 management controller
Avocent® MergePoint IPMI 2.0 web interface:
Network settings
Network security settings
Hardware information
Users control
Services settings
IPMI settings
Sessions control
LDAP settings
Power control
Fan proles
Voltages, fans and temperatures monitoring
System event log
Events management (platform events, trap settings, email settings)
Serial Over LAN
vKVM & vMedia (HTML5)
Power Supply 4 x 2200W redundant PSU
80 PLUS Platinum
AC Input:
- 100-127V/ 14A, 47-63Hz
- 200-240V/ 12.6A, 47-63Hz
DC Output:
- Max. 1200W/ 100-127V, +12.12V/ 95.6A, +12Vsb/ 3.5A
- Max. 2200W/ 200-240V, +12.12V/ 178.1A, +12Vsb/ 3.5A
NOTE: The system power supply requires C19 type power cord.
Operating
System
Compatibility
Windows Server 2012 R2 (x64) Update 1
Windows Server 2016
Red Hat Enterprise Linux 6.9 (x64)
Red Hat Enterprise Linux 7.3 (x64)
SUSE Linux Enterprise Server 11.4 (x64)
SUSE Linux Enterprise Server 12.2 (x64)
Ubuntu 16.04.2 LTS (x64)
VMware ESXi 6.5
Ambient
Temperature
Relative
Humidity
Operating temperature: 10°C to 35°C
Non-operating temperature: -40°C to 60°C
Operating humidity: 8% - 80% (non-condensing)
Non-operating humidity: 20% - 95% (non-condensing)
System
Dimension
4U
447 (W) x 175.2 (H) x 822.15 (D) (mm)
17.60 (W) x 6.90 (H) x 32.37 (D) (inch)
Gross weight: 57kg
* We reserve the right to make any changes to the product specications and product-related information without prior
notice.

- 15 - Hardware Installation
1-3 System Block Diagram
2666/2400/2133 MHz
PCIe3.0 x16
PCIe3.0 x8
2666/2400/2133 MHz
2A~2D
PCIe3.0 x16
PLX
DMI3 x4
Skylake-SP
LGA 3647
Socket P0
CPU0
PCIe3.0 x8
PCIe3.0 x8
PCIe3.0 x8
PCIe3.0 x16
PLX
PCIe3.0 x16
PLX
Skylake-SP
LGA 3647
Socket P0
CPU1
DDR4
2DPC
6-Channel
DDR4
2DPC
6-Channel
12 x DIMM slots 12 x DIMM slots
10-bay 2.5” SATA with 4-bay 2.5” NVMe SSD
PCIe x16 slot
(Front side, support MD2 card)
PCIe x8 Proprietary slot
(Rear side, for OCP LAN card)
PCIe x16 slot
(Inniband)
PCIe x16 slot
(Inniband)
PCIe x16 slot
(Inniband)
PCIe x16 slot
(Inniband)
2/3 x UPI @9.6/10.4 GT/s
NVLINK
PLX
GPU#0 GPU#1 GPU#6 GPU#7GPU#2 GPU#3 GPU#4 GPU#5
BIOS
SPI Flash 32MB
PCH
Intel C621
Lewisburg
8 x SATAIII
PCIe
Switch
PCIe
Switch
PCIe
Switch
PCIe
Switch
GPU
2
GPU
0
GPU
3
GPU
1
CPU
0
CPU
1
GPU
4
GPU
6
GPU
5
GPU
7
UPI / QPI
PCIe Gen3 x16 @ 8Gb/s
Pascal: 4 NVLinks @ 40GB/s
Volta: 6 NVLinks @ 50GB/s
1-4 NV Link Diagram

Hardware Installation - 16 -
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- 17 - System Appearance
Chapter 2 System Appearance
2-1 Front View
• Go to the section 2-3 Front Panel Buttons and LEDs for detail description of function
LEDs.
12 3 4 5 6
7
HDD #0
HDD #1
HDD #2
HDD #3
HDD #4
HDD #5
HDD #6
HDD #7
HDD #8
HDD #9
No. Description No. Description
1. PCIe Card Slot 5. USB 3.0 Port x 2
2. Front Panel LEDs and Buttons 6. VGA Port
3. 1 GbE LAN Port x 2 7.
2.5-inch HDD Bay x 10 (#0 to #9)
*SATA supported only: #0 to #5
*Both SATA and NVMe supported: #6 to #7
*NVMe supported only: #8 to #9
4. 10/100/1000 Server Management LAN Port

System Appearance - 18 -
2-2 Rear View
5
6
4 3
12
PSU #1PSU #2PSU #3PSU #4
No. Description No. Description
1. PCIe x16 Slot x 2 (for LAN card) 4. OCP Card Slot (optional)
2. PCIe x16 Slot x 2 (for LAN card) 5. 10/100/1000 Server Management
LAN Port (*1)
3. Power Supply Unit x 4 (PSU #1 to #4) 6. LAN Module
NOTE:
*1: An OCP LAN card is required for using the 10/100/1000 server management LAN port on the rear panel.

- 19 - System Appearance
2-3 Front Panel Buttons and LEDs
1
3456
2
No. Name Color Status Description
1. Reset Button -- -- Press this button to reset the system.
2. HDD Status
LED
Green On Indicates locating the HDD.
Blink Indicates accessing the HDD.
Amber On Indicates HDD error.
Green /
Amber Blink Indicates HDD rebuilding.
N/A Off Indicates no HDD access or no HDD error.
3. System
Status LED
Green Solid On Indicates system is operating normally.
Amber
Solid On
Indicates a critical condition, may include:
- System fan failure
- System temperature
Blink
Indicates non-critical condition, may include:
- Redundant power module failure
- Temperature and voltage issue
- Chassis intrusion
N/A Off
Indicates system is not ready, may include:
- POST error
- NMI error
- Processor or terminator is missing
4. NMI Button -- --
Press this button for the server to generate a NMI to the
processor. If multiple-bit ECC errors occur, the server will
effectively be handled.
5. ID Button
with LED -- -- Press this button to activate system identication.
6. Power Button
with LED
Green On Indicates the system is powered on.
Green Blink System is in ACPI S1 slate (sleep mode).
N/A Off Indicates system is not powered on or in ACPI S5 slate
(power off) or system is in ACPI S4 slate (hibernation mode).

System Appearance - 20 -
2-4 Front System LAN LEDs
1 1
1
2 2
2
No. Name Color Status Description
1. GbE Speed
LED
Yellow On 1 Gbps data rate
Green On 100 Mbps data rate
N/A Off 10 Mbps data rate
2. GbE Link /
Activity LED
Green On Link between system and network or no access
Blink Data transmission or reception is occurring.
N/A Off No data transmission or reception is occurring.
2-5 Rear System LAN LEDs
12
No. Name Color Status Description
1. GbE Speed
LED
Yellow On 1 Gbps data rate
Green On 100 Mbps data rate
N/A Off 10 Mbps data rate
2. GbE Link /
Activity LED
Green On Link between system and network or no access
Blink Data transmission or reception is occurring.
N/A Off No data transmission or reception is occurring.