Intel S5500WB12V User manual

Intel®Server Board S5500WB
Technical Product Specification
Intel order number E53971-008
Revision 1.9
February, 2012
Enterprise Platforms and Services Division

Revision History Intel® Server Board S5500WB TPS
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Intel order number E53971-008
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Revision History
Date
Revision
Number
Modifications
03/30/2009
1.0
Initial Release.
04/29/2009
1.1
Formatting corrections.
05/20/2009
1.2
Updated heatsink installation steps.
Corrected processor fault table.
Added jumper location figure.
08/03/2009
1.3
Updated memory support.
Corrected PCIe slot speed.
Removed S4 support.
01/12/2010
1.4
Corrected USB header pin-out.
03/09/2010
1.5
Updated Power Supply communication bus requirements.
Increased maximum supported memory to 128GB.
Added support for 5600 series processors.
04/21/2010
1.6
Updated12V SKU board picture (Figure 1).
07/18/2010
1.7
Removed Rapid Boot Toolkit section.
Updated NIC LEDs.
Updated video resolution.
03/21/2010
1.8
Updated typo in board feature set.
02/16/2012
1.9
Updated typo in board feature set.

Intel® Server Board S5500WB TPS Disclaimers
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Disclaimers
Information in this document is provided in connection with Intel®products. No license, express
or implied, by estoppel or otherwise, to any intellectual property rights is granted by this
document. Except as provided in Intel's Terms and Conditions of Sale for such products, Intel
assumes no liability whatsoever, and Intel disclaims any express or implied warranty, relating to
sale and/or use of Intel products including liability or warranties relating to fitness for a particular
purpose, merchantability, or infringement of any patent, copyright or other intellectual property
right. Intel products are not intended for use in medical, life saving, or life sustaining
applications. Intel may make changes to specifications and product descriptions at any time,
without notice.
Designers must not rely on the absence or characteristics of any features or instructions
marked "reserved" or "undefined." Intel reserves these for future definition and shall have no
responsibility whatsoever for conflicts or incompatibilities arising from future changes to them.
This document contains information on products in the design phase of development. Do not
finalize a design with this information. Revised information will be published when the product is
available. Verify with your local sales office that you have the latest datasheet before finalizing
a design.
This document may contain design defects or errors known as errata which may cause the
product to deviate from published specifications. Current characterized errata are available
on request.
This document and the software described in it are furnished under license and may only be
used or copied in accordance with the terms of the license. The information in this manual is
furnished for informational use only, is subject to change without notice, and should not be
construed as a commitment by Intel Corporation. Intel Corporation assumes no responsibility or
liability for any errors or inaccuracies that may appear in this document or any software that
may be provided in association with this document.
Except as permitted by such license, no part of this document may be reproduced, stored in a
retrieval system, or transmitted in any form or by any means without the express written
consent of Intel Corporation.
Intel and Xeon are trademarks or registered trademarks of Intel Corporation.
*Other brands and names may be claimed as the property of others.
Copyright © Intel Corporation 2011

Table of Contents Intel® Server Board S5500WB TPS
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Table of Contents
1. Introduction ........................................................................................................................1
1.1 Section Outline.......................................................................................................1
1.2 Server Board Use Disclaimer.................................................................................1
2. Server Board Overview......................................................................................................2
2.1 Intel®Server Board S5500WB Server Board..........................................................4
2.2 Server Board Connector and Component Layout...................................................6
2.2.1 Board Rear Connector Placement..........................................................................8
2.2.2 Server Board Mechanical Drawings .......................................................................8
3. Functional Architecture ...................................................................................................13
3.1 High Level Product Features................................................................................13
3.2 Functional Block Diagram ....................................................................................14
3.3 Processor Subsystem ..........................................................................................15
3.3.1 Processor Support ...............................................................................................15
3.3.2 Processor Population Rules.................................................................................15
3.3.3 Installing or Replacing the Processor...................................................................17
3.3.4 Intel®QuickPath Interconnect (Intel®QPI)............................................................20
3.4 Intel®QuickPath Memory Controller.....................................................................21
3.4.1 Supported Memory...............................................................................................21
3.4.2 Memory Subsystem Nomenclature.......................................................................21
3.4.3 ECC Support........................................................................................................22
3.4.4 Memory Reservation for Memory-mapped Functions...........................................22
3.4.5 High-Memory Reclaim..........................................................................................22
3.4.6 Memory Population Rules ....................................................................................23
3.4.7 Installing and Removing Memory.........................................................................23
3.4.8 Channel-Independent Mode.................................................................................25
3.4.9 Memory RAS........................................................................................................25
3.4.10 Memory Error LED...............................................................................................26
3.5 Intel® 5500 Chipset IOH........................................................................................26
3.5.1 IOH24D PCI Express*..........................................................................................26
3.6 Management Engine............................................................................................27
3.7 Intel®82801Jx I/O Controller Hub (ICH10R).........................................................28
3.7.1 Serial ATA Support ..............................................................................................28

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3.7.2 USB 2.0 Support..................................................................................................29
3.8 Network Interface Controller (NIC).......................................................................30
3.8.1 MAC Address Definition.......................................................................................31
3.8.2 LAN Connector Ordering......................................................................................31
3.9 Integrated Baseboard Management Controller.....................................................31
3.9.1 Integrated BMC Embedded LAN Channel............................................................33
3.9.2 RMM3 Advanced Management Board:.................................................................34
3.10 Serial Ports ..........................................................................................................34
3.11 Wake-up Control..................................................................................................34
3.12 Integrated Video Support .....................................................................................34
3.12.1 Video Modes........................................................................................................35
3.12.2 Dual Video ...........................................................................................................35
3.12.3 Front Panel Video ................................................................................................35
3.13 I/O Slots...............................................................................................................36
3.13.1 X16 Riser Slot Definition ......................................................................................36
3.13.2 PE WIDTH Strapping...........................................................................................36
3.13.3 Slot 1 PCI Express* x8 Connector........................................................................36
3.13.4 I/O Module Connector..........................................................................................37
4. Intel®I/O Expansion Modules..........................................................................................38
5. Platform Management Features ......................................................................................40
5.1 BIOS Feature Overview .......................................................................................40
5.1.1 EFI Support..........................................................................................................40
5.1.2 BIOS Recovery ....................................................................................................40
5.2 BMC Feature Overview........................................................................................40
5.2.1 Server Engines Pilot II Controller .........................................................................40
5.2.2 BMC Firmware.....................................................................................................41
5.2.3 BMC Basic Features ............................................................................................41
5.2.4 BMC Advanced Features .....................................................................................42
5.3 Management Engine (ME) ...................................................................................42
5.3.1 Overview..............................................................................................................42
5.3.2 BMC - Management Engine Interaction................................................................43
5.4 Data Center Manageability Interface....................................................................43
5.5 Other Platform Management................................................................................43
5.5.1 Wake On LAN (WOL) ..........................................................................................43

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5.5.2 PCI Express* Power management.......................................................................43
5.5.3 PMBus*................................................................................................................43
5.6 I2C\SMBUS Architecture Block............................................................................44
5.6.1 I2C\SMBUS Device Addresse..............................................................................44
6. Configuration Jumpers....................................................................................................46
6.1.1 Force IBMC Update (J1B5)..................................................................................47
6.1.2 Password Clear (J1C2)........................................................................................48
6.1.3 BIOS Recovery Mode (J1C3)...............................................................................49
6.1.4 Reset BIOS Configuration (J1B4) ........................................................................50
6.1.5 Video Master (J6A3) ............................................................................................50
6.1.6 ME Firmware Force Update (J7A2)......................................................................51
6.1.7 Serial Interface (J6A2) .........................................................................................51
7. Connector/Header Locations and Pin-out ......................................................................52
7.1 Power Connectors................................................................................................52
7.2 System Management Headers.............................................................................54
7.2.1 Intel® Remote Management Module 3 (Intel® RMM3) Connector ..........................54
7.2.2 BMC Power Cycle Header (12V Only)..................................................................54
7.2.3 Hard Drive Activity (Input) LED Header................................................................55
7.2.4 IPMB Header........................................................................................................55
7.2.5 SGPIO Header.....................................................................................................55
7.3 SSI Control Panel Connector ...............................................................................55
7.3.1 Power Button .......................................................................................................56
7.3.2 Reset Button........................................................................................................56
7.3.3 NMI Button...........................................................................................................56
7.3.4 Chassis Identify Button ........................................................................................56
7.3.5 Power LED...........................................................................................................57
7.3.6 System Status LED..............................................................................................57
7.3.7 Chassis ID LED....................................................................................................59
7.4 I/O Connectors.....................................................................................................59
7.4.1 PCI Express* Connectors.....................................................................................59
7.4.2 VGA Connectors..................................................................................................61
7.4.3 NIC Connectors....................................................................................................62
7.4.4 SATA Connectors ................................................................................................64
7.4.5 Intel®I/O Expansion Module Connector ...............................................................64

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7.4.6 Serial Port Connectors.........................................................................................66
7.4.7 USB Connectors ..................................................................................................66
7.5 Fan Headers........................................................................................................67
8. Intel®Light-Guided Diagnostics......................................................................................68
8.1 5-V Standby LED .................................................................................................68
8.2 Fan Fault LEDs....................................................................................................69
8.3 System Status LED..............................................................................................69
8.4 DIMM Fault LEDs.................................................................................................73
8.5 POST Code Diagnostic LEDs ..............................................................................74
8.6 Front Panel Support.............................................................................................75
9. Design and Environmental Specifications .....................................................................76
9.1 Fan Speed Control Thermal Management ...........................................................76
9.2 Thermal Sensors..................................................................................................78
9.2.1 Processor PECI Temperature Sensor..................................................................78
9.2.2 Memory Temperature Sensor ..............................................................................79
9.2.3 Board Temperature Sensor..................................................................................79
9.2.4 Thermals Sensor Placement................................................................................79
9.3 Heatsinks.............................................................................................................80
9.3.1 Unified Retention System Support .......................................................................81
9.4 Errors...................................................................................................................82
9.4.1 PROCHOT#.........................................................................................................82
9.4.2 THERMTRIP#......................................................................................................82
9.4.3 CATERR#............................................................................................................82
10. Power Subsystem.............................................................................................................83
10.1 Server Board Power Distribution..........................................................................83
10.2 Power Supply Compatibility..................................................................................83
10.3 Power Sequencing and Reset Distribution...........................................................84
11. Regulatory and Certification Information .......................................................................85
11.1 Product Regulation Requirements........................................................................85
11.1.1 Product Safety Compliance..................................................................................85
11.1.2 Product EMC Compliance –Class A Compliance ................................................85
11.1.3 Certifications / Registrations / Declarations..........................................................85
11.2 Product Regulatory Compliance Markings ...........................................................86
11.3 Electromagnetic Compatibility Notices .................................................................86

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11.3.1 FCC Verification Statement (USA).......................................................................86
11.3.2 ICES-003 (Canada)..............................................................................................87
11.3.3 Europe (CE Declaration of Conformity)................................................................88
11.3.4 BSMI (Taiwan) .....................................................................................................88
11.3.5 KCC (Korea) ........................................................................................................88
Appendix A: POST Code LED Decoder .................................................................................89
Appendix B: Video POST Code Errors..................................................................................96
Glossary ................................................................................................................................100
Reference Documents..........................................................................................................103

Intel® Server Board S5500WB TPS List of Figures
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List of Figures
Figure 1. Intel®Server Board S5500WB 12V..............................................................................4
Figure 2. Intel Server Board S5500WB SSI................................................................................5
Figure 3. Intel®Server Board S5500WB Components (both SKUs are shown)...........................6
Figure 4. Rear Panel Connector Placement:...............................................................................8
Figure 5. Baseboard and Mounting holes....................................................................................9
Figure 6. Connector Locations..................................................................................................10
Figure 7. Primary Side Height Restrictions................................................................................11
Figure 8. Secondary Side Height Restrictions...........................................................................12
Figure 9. Intel®Server Board S5500WB Functional Block Diagram..........................................14
Figure 10. Lifting the load lever of ILM cover ............................................................................17
Figure 11. Removing the socket cover......................................................................................17
Figure 12. Installing processor..................................................................................................18
Figure 13. Package Installation/Remove Feature .....................................................................19
Figure 14. Installing/Removing Heatsink...................................................................................20
Figure 15. Intel®QPI Link..........................................................................................................20
Figure 16. Memory Channel Population....................................................................................23
Figure 17. Installing Memory.....................................................................................................24
Figure 18. Mirroring Memory Configuration...............................................................................26
Figure 19. Integrated BMC Hardware .......................................................................................33
Figure 20. S5500WB I2C\SMBUS Block Diagram ....................................................................44
Figure 21: Jumper Blocks (J1B5, J1C2, J1C3, J1B4, J6A3, J6A2, J7A2).................................46
Figure 22: 5-V Standby Status LED Location............................................................................68
Figure 23. Fan Fault LED Locations..........................................................................................69
Figure 24. System Status LED Location ...................................................................................70
Figure 25. DIMM Fault LEDs Locations.....................................................................................73
Figure 26. Rear Panel Diagnostic LEDs....................................................................................74
Figure 27: Thermal Zones.........................................................................................................76
Figure 28: Location of Fan Connectors.....................................................................................77
Figure 29. Fans and Sensors Block Diagram............................................................................78
Figure 30: Temp Sensor Location.............................................................................................80
Figure 31. Unified Retention System and Unified Backplate Assembly.....................................81

List of Figures Intel® Server Board S5500WB TPS
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Figure 32. Power Distribution Diagram .....................................................................................83
Figure 33. Diagnostic LED Placement Diagram........................................................................89

Intel® Server Board S5500WB TPS List of Tables
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List of Tables
Table 1. Intel®Server Board S5500WB Feature Set...................................................................2
Table 2. Intel®Server Board S5500WB System Interconnects ...................................................7
Table 3. Intel®Server Board S5500WB Features .....................................................................13
Table 4. Mixed Processor Configurations..................................................................................16
Table 5. DIMM Nomenclature ...................................................................................................22
Table 6. IOH24D PCI Express* Bus Segments.........................................................................27
Table 7. NIC 1 Status LED........................................................................................................30
Table 8. RMM3 Features ..........................................................................................................34
Table 9. Supported Video Modes..............................................................................................35
Table 10. Dual Video Options...................................................................................................35
Table 11. PEWIDTH Strapping Bits..........................................................................................36
Table 12. Intel®I/O Expansion Module Bus PEWIDTH Bits ......................................................37
Table 13. Intel®I/O Expansion Module Product Codes.............................................................38
Table 14: BMC Basic Features .................................................................................................41
Table 15. Advanced Features...................................................................................................42
Table 16. I2C/SMBus Device Address Assignment...................................................................44
Table 17: Server Board Jumpers (J1B5, J1C2, J1C3, J1B4, J6A3, J6A2) ................................47
Table 18. Force IBMC Update Jumper......................................................................................47
Table 19. Password Clear Jumper............................................................................................48
Table 20. BIOS Recovery Mode Jumper...................................................................................49
Table 21. Reset BIOS Jumper..................................................................................................50
Table 22. Video Master Jumper................................................................................................50
Table 23. SSI SKU 24-pin 2x12 Connector (J9B3)....................................................................52
Table 24. CPU 12V Power 2x4 Connector (J5K1).....................................................................52
Table 25. SSI Power Control (J9D1).........................................................................................52
Table 26. 12-V only 2x4 Connector (replaces EPSD12V 2x12 connector) (J9D2) ....................53
Table 27. 12-V Only Power Control (replaces the 1x5 power control) (J9D1) (FOXCONN
ELECTRONICS INC HF1107V-P1 or TYCO ELECTRONICS CORPORATION 5-104809-6)53
Table 28. Peripheral Power (Only for 12-V only SKU) (J8K2) (iPN: C22293-003 MOLEX
CONNECTOR CORPORATION 43045-0627 )...................................................................53
Table 29. Intel®RMM3 Connector Pin-out (J5B1).....................................................................54
Table 30. BMC Power Cycle Header (J1D2).............................................................................54
Table 31. IPMB Header 4-pin (J1B2) ........................................................................................55

List of Tables Intel® Server Board S5500WB TPS
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Table 32. SGPIO Header (J1B1) ..............................................................................................55
Table 33. Front Panel SSI Standard 24-pin Connector Pin-out (J1E2)......................................55
Table 34. Power LED Indicator States ......................................................................................57
Table 35. System Status LED...................................................................................................58
Table 36. Chassis ID LED Indicator States...............................................................................59
Table 37. Slot 6 Riser Connector (J4B1)...................................................................................59
Table 38. Slot 1 PCI Express* x8 Connector (J1B3) .................................................................60
Table 39. VGA External Video Connector (J6A1)......................................................................61
Table 40. VGA Internal Video Connector (J1D1) ......................................................................62
Table 41. RJ-45 10/100/1000 NIC Connector Pin-out (J8A2, J9A1)..........................................63
Table 42. SATA Connectors .....................................................................................................64
Table 43. 50-pin Intel®I/O Expansion Module Connector Pin-out (J2B1, J3B1)........................65
Table 44. External RJ-45 Serial Port A (COM1) (J7A1).............................................................66
Table 45. Internal 9-pin Serial B (COM2) (J1A2).......................................................................66
Table 46. External USB Connector (J8A1, J9A1)).....................................................................66
Table 47. Internal USB Connector (J1C1 and J9A2).................................................................66
Table 48. Low-Profile Internal USB Connector (J1E3)..............................................................67
Table 49. SSI 4-pin Fan Connector (J2K2, J2K3, J3K1, J7K1, J8K4, J8K5).............................67
Table 50. 8-pin Fan Connector (J2K1 & J8K3) (MOLEX CONNECTOR CORPORATION 53398-
0890 or 53398-0871 ).........................................................................................................67
Table 51. System Status LED...................................................................................................71
Table 52. Standard Front Panel Functionality ...........................................................................75
Table 53. Fan Connector Location & Detail...............................................................................77
Table 54. Fan Connector Location & Detail...............................................................................78
Table 55: Product Regulatory Compliance Markings ................................................................86
Table 56. POST Progress Code LED Example.........................................................................90
Table 57. Diagnostic LED POST Code Decoder.......................................................................91
Table 58. POST Error Messages and Handling........................................................................96
Table 59: Glossary..................................................................................................................100

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Intel® Server Board S5500WB TPS Introduction
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1. Introduction
The Intel®Server Board S5500WB is a dual socket server using the Intel®Xeon®Processor
5500 series and 5600 series processors, in combination with the IOH and ICH10R to provide a
balanced feature set between technology leadership and cost.
1.1 Section Outline
This document is divided into the following chapters:
Section 1 –Introduction
Section 2 –Server Board Overview
Section 3 –Functional Architecture
Section 4 –I/O Expansion Modules
Section 5 –Platform Management Features
Section 6 –Configuration Jumpers
Section 7 –Connector and Header Location and Pin-out
Section 8 –Intel®Light-Guided Diagnostics
Section 9 –Design and Environmental Specifications
Section 10 –Power Subsystem
Section 11 - Regulatory and Certification Information
Appendix A –POST Code LED Decoder
Appendix B –Video POST Code Errors
Glossary
Reference Documents
1.2 Server Board Use Disclaimer
Intel Corporation server boards contain a number of high-density VLSI and power delivery
components that need adequate airflow to cool. Intel ensures through its own chassis
development and testing that when Intel server building blocks are used together, the fully
integrated system will meet the intended thermal requirements of these components. It is the
responsibility of the system integrator who chooses not to use Intel developed server building
blocks to consult vendor datasheets and operating parameters to determine the amount of air
flow required for their specific application and environmental conditions. Intel Corporation
cannot be held responsible if components fail or the server board does not operate correctly
when used outside any of their published operating or non-operating limits.

Server Board Overview Intel® Server Board S5500WB TPS
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2. Server Board Overview
The Intel®Server Board S5500WB is a monolithic printed circuit board (PCB) with features
designed to support the Internet Portal Data Center markets. The following table provides a
high-level product feature list.
Table 1. Intel®Server Board S5500WB Feature Set
Feature
Description
Processors
Support for one or two Intel®Xeon®Processor 5500 and 5600 series processors in
FC-LGA 1366 Socket B package with up to 95 W Thermal Design Power (TDP)
Supports future processor compatibility guidelines
4.8 GT/s, 5.86 GT/s, and 6.4 GT/s Intel®QuickPath Interconnect (Intel®QPI)
Meets EVRD11.1
Memory
Support for 800/1066/1333 MT/s ECC registered (RDIMM) or unbuffered (UDIMM)
DDR3 memory.
8 DIMMs total across six memory channels (three channels per processor in a
2:1:1 configuration)
VRD optimized to support QR x8 DIMMs
No support for QR x4 DIMMs
Chipset
Intel®5500 Chipset IOH
Intel®82801Jx I/O Controller Hub (ICH10R)
I/O Control
External connections:
DB-15 Video connectors
RJ-45 serial Port A connector
RJ-45 connector for 10/100/1000 LAN
One 2x USB 2.0 connectors
One RJ-45 over USB for 10/100/1000 LAN
Internal connections:
Two USB 2x5 pin header, supporting four USB 2.0 ports
One low-profile USB 2x5 pin
One DH-10 Serial Port B header
One 2x8 pin VGA header with presence detection to switch from rear I/O video
connector
Six SATA II connectors
Intel®I/O Expansion Module Dual Connectors
One RMM3 connector to support optional Intel®Remote Management Module 3
SATA SW RAID 5 Activation Key Connector
One SSI-EEB compliant front panel header
Power Connections
SSI SKU
One SSI-EEB compliant 24-pin main power connector (SSI only SKU)
One SSI compliant 8-pin CPU power connector
One SSI compliant 5-pin power control Connector (SSI only SKU)
12-V Only SKU
One 8-pin power connector
One 6-pin Aux power connector for 3.3 V and 5 V
One 7-pin power control connector

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Feature
Description
System Fan Support
Two 8-pin fan headers for double rotor memory fans and six 4-pin fan headers
supporting two processor zones and two memory zones in a redundant fashion
Add-in Adapter Support
One riser slot supporting both full-height and low-profile 1U and 2U MD2 PCI
Express* x16 riser cards PCI gen2 Express* x8 w/ x16 connector.
One riser slot supporting PCI Express* x8 riser cards PCI gen2 Express* x4 w/ x8
connector.
Two Intel®I/O Expansion Module card connectors supporting double- and single-
wide I/O modules.
Video
Onboard ServerEngines* LLC Pilot II Controller
Matrox* G200 2D Video Graphics controller
Uses 8 MB of the BMC 32 MB DDR2 Memory
Hard Drive
Support for six ICH10R SATA II ports
Optional support for SW RAID 5 with activation key
LAN
Two 10/100/1000 ports provided by Intel®82576 PHYs with Intel®I/O Acceleration
Technology 2 support
Server Management
Onboard ServerEngines* LLC Pilot II Controller.
Integrated Baseboard Management Controller (Integrated BMC), IPMI 2.0 compliant
Basic
BMC Controller: ARM 926E-S microcontroller
Super IO: Serial Port logic, legacy interfaces, LPC interface, Port80
Hardware Monitoring: Fan speed control and voltage monitoring
Advanced
Video and USB compression and redirection
NC-SI port, a high-speed sideband management interface
Integrated Super I/O on LPC interface

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2.1 Intel®Server Board S5500WB Server Board
The Intel®Server Board S5500WB has two board SKUs, such as SSI-compliant and 12-V-only-
SKU. The board layouts of the SKUs are shown.
Figure 1. Intel®Server Board S5500WB 12V

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Figure 2. Intel Server Board S5500WB SSI

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2.2 Server Board Connector and Component Layout
Figure 3. Intel®Server Board S5500WB Components (both SKUs are shown)