MSI MS-96D2 User manual

i
MS-96D2
(v1.X) Server Board

ii
Preface ▍MS-96D2
Preface ▍MS-96D2
Copyright Notice
The material in this document is the intellectual property of MICRO-STAR INTER-
NATIONAL. We take every care in the preparation of this document, but no guar-
antee is given as to the correctness of its contents. Our products are under con-
tinual improvement and we reserve the right to make changes without notice.
Trademarks
All trademarks are the properties of their respective owners.
MSI®is registered trademark of Micro-Star Int’l Co.,Ltd.
NVIDIA®is registered trademark of NVIDIA Corporation.
ATI®is registered trademark of ATI Technologies, Inc.
AMD®is registered trademarks of AMD Corporation.
Intel®is registered trademarks of Intel Corporation.
Windows®is registered trademarks of Microsoft Corporation.
AMI®is registered trademark of Advanced Micro Devices, Inc.
Award®is a registered trademark of Phoenix Technologies Ltd.
Sound Blaster®is registered trademark of Creative Technology Ltd.
Realtek®is registered trademark of Realtek Semiconductor Corporation.
JMicron®is registered trademark of JMicron Technology Corporation.
Netware®is a registered trademark of Novell, Inc.
Revision History
Revision Revision History Date
V1.1 For PCB v1.x April 2010
Technical Support
If a problem arises with your system and no solution can be obtained from the
user’s manual, please contact your place of purchase or local distributor. Alterna-
tively, please try the following help resources for further guidance.
Visit the MSI website for FAQ, technical guide, BIOS updates,
driver updates, and other information: http://www.msi.com/index.
php?func=service
Contact our technical staff at: http://ocss.msi.com
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Preface ▍MS-96D2
iii
Preface ▍MS-96D2
Safety Instructions
Always read the safety instructions carefully.
Keep this User’s Manual for future reference.
Keep this equipment away from humidity.
Lay this equipment on a reliable at surface before setting it up.
The openings on the enclosure are for air convection hence protects the
equipment from overheating. DO NOT COVER THE OPENINGS.
Make sure the voltage of the power source and adjust properly 110/220V
before connecting the equipment to the power inlet.
Place the power cord such a way that people can not step on it. Do not place
anything over the power cord.
Always Unplug the Power Cord before inserting any add-on card or mod-
ule.
All cautions and warnings on the equipment should be noted.
Never pour any liquid into the opening that could damage or cause electrical
shock.
If any of the following situations arises, get the equipment checked by ser-
vice personnel:
The power cord or plug is damaged.
Liquid has penetrated into the equipment.
The equipment has been exposed to moisture.
The equipment does not work well or you can not get it work according
to User’s Manual.
The equipment has dropped and damaged.
The equipment has obvious sign of breakage.
DO NOT LEAVE THIS EQUIPMENT IN AN ENVIRONMENT UNCONDI-
TIONED, STORAGE TEMPERATURE ABOVE 60oC (140oF), IT MAY DAM-
AGE THE EQUIPMENT.
CAUTION: Danger of explosion if battery is incorrectly replaced. Replace only
with the same or equivalent type recommended by the manufacturer.
警告使用者:
這是甲類資訊產品，在居住的環境中使用時，可能會造成無線電干擾，在這種情
況下，使用者會被要求採取某些適當的對策。
廢電池請回收
For better environmental protection, waste batteries should be col-
lected separately for recycling special disposal.
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iv
Preface ▍MS-96D2
Preface ▍MS-96D2
FCC-B Radio Frequency Interference Statement
This equipment has been tested and
found to comply with the limits for a
Class B digital device, pursuant to Part
15 of the FCC Rules. These limits are
designed to provide reasonable pro-
tection against harmful interference in a residential installation. This equipment
generates, uses and can radiate radio frequency energy and, if not installed and
used in accordance with the instructions, may cause harmful interference to radio
communications. However, there is no guarantee that interference will not occur
in a particular installation. If this equipment does cause harmful interference to
radio or television reception, which can be determined by turning the equipment
off and on, the user is encouraged to try to correct the interference by one or more
of the measures listed below.
Reorient or relocate the receiving antenna.
Increase the separation between the equipment and receiver.
Connect the equipment into an outlet on a circuit different from that to
which the receiver is connected.
Consult the dealer or an experienced radio/television technician for help.
Notice 1
The changes or modications not expressly approved by the party responsible for
compliance could void the user’s authority to operate the equipment.
Notice 2
Shielded interface cables and A.C. power cord, if any, must be used in order to
comply with the emission limits.
VOIR LA NOTICE D’INSTALLATION AVANT DE RACCORDER AU RE-
SEAU.
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This device complies with Part 15 of the FCC Rules. Operation is subject to the
following two conditions:
this device may not cause harmful interference, and
this device must accept any interference received, including interference that
may cause undesired operation.
1)
2)
Micro-Star International
MS-96D2

Preface ▍MS-96D2
v
Preface ▍MS-96D2
WEEE Statement
ENGLISH
To protect the global environment and as an environmentalist, MSI must
remind you that...
Under the European Union (“EU”) Directive on Waste Electrical and
Electronic Equipment, Directive 2002/96/EC, which takes effect on Au-
gust 13, 2005, products of “electrical and electronic equipment” cannot
be discarded as municipal waste anymore and manufacturers of covered electronic
equipment will be obligated to take back such products at the end of their useful life.
MSI will comply with the product take back requirements at the end of life of MSI-
branded products that are sold into the EU. You can return these products to local
collection points.
DEUTSCH
Hinweis von MSI zur Erhaltung und Schutz unserer Umwelt
Gemäß der Richtlinie 2002/96/EG über Elektro- und Elektronik-Altgeräte dürfen
Elektro- und Elektronik-Altgeräte nicht mehr als kommunale Abfälle entsorgt werden.
MSI hat europaweit verschiedene Sammel- und Recyclingunternehmen beauftragt,
die in die Europäische Union in Verkehr gebrachten Produkte, am Ende seines Leb-
enszyklus zurückzunehmen. Bitte entsorgen Sie dieses Produkt zum gegebenen
Zeitpunkt ausschliesslich an einer lokalen Altgerätesammelstelle in Ihrer Nähe.
FRANÇAIS
En tant qu’écologiste et an de protéger l’environnement, MSI tient à rappeler
ceci...
Au sujet de la directive européenne (EU) relative aux déchets des équipement élec-
triques et électroniques, directive 2002/96/EC, prenant effet le 13 août 2005, que les
produits électriques et électroniques ne peuvent être déposés dans les décharges
ou tout simplement mis à la poubelle. Les fabricants de ces équipements seront
obligés de récupérer certains produits en n de vie. MSI prendra en compte cette
exigence relative au retour des produits en n de vie au sein de la communauté
européenne. Par conséquent vous pouvez retourner localement ces matériels dans
les points de collecte.
РУССКИЙ
Компания MSI предпринимает активные действия по защите окружающей
среды, поэтому напоминаем вам, что....
В соответствии с директивой Европейского Союза (ЕС) по предотвращению
загрязнения окружающей среды использованным электрическим и электронным
оборудованием (директива WEEE 2002/96/EC), вступающей в силу 13
августа 2005 года, изделия, относящиеся к электрическому и электронному
оборудованию, не могут рассматриваться как бытовой мусор, поэтому
производители вышеперечисленного электронного оборудования обязаны
принимать его для переработки по окончании срока службы. MSI обязуется
соблюдать требования по приему продукции, проданной под маркой MSI на
территории EC, в переработку по окончании срока службы. Вы можете вернуть
эти изделия в специализированные пункты приема.

vi
Preface ▍MS-96D2
Preface ▍MS-96D2
ESPAÑOL
MSI como empresa comprometida con la protección del medio ambiente, recomien-
da:
Bajo la directiva 2002/96/EC de la Unión Europea en materia de desechos y/o equi-
pos electrónicos, con fecha de rigor desde el 13 de agosto de 2005, los productos
clasicados como “eléctricos y equipos electrónicos” no pueden ser depositados en
los contenedores habituales de su municipio, los fabricantes de equipos electrónic-
os, están obligados a hacerse cargo de dichos productos al termino de su período
de vida. MSI estará comprometido con los términos de recogida de sus productos
vendidos en la Unión Europea al nal de su periodo de vida. Usted debe depositar
estos productos en el punto limpio establecido por el ayuntamiento de su localidad o
entregar a una empresa autorizada para la recogida de estos residuos.
NEDERLANDS
Om het milieu te beschermen, wil MSI u eraan herinneren dat….
De richtlijn van de Europese Unie (EU) met betrekking tot Vervuiling van Electrische
en Electronische producten (2002/96/EC), die op 13 Augustus 2005 in zal gaan kun-
nen niet meer beschouwd worden als vervuiling. Fabrikanten van dit soort producten
worden verplicht om producten retour te nemen aan het eind van hun levenscyclus.
MSI zal overeenkomstig de richtlijn handelen voor de producten die de merknaam
MSI dragen en verkocht zijn in de EU. Deze goederen kunnen geretourneerd wor-
den op lokale inzamelingspunten.
SRPSKI
Da bi zaštitili prirodnu sredinu, i kao preduzeće koje vodi računa o okolini i prirodnoj
sredini, MSI mora da vas podesti da…
Po Direktivi Evropske unije (“EU”) o odbačenoj ekektronskoj i električnoj opremi, Di-
rektiva 2002/96/EC, koja stupa na snagu od 13. Avgusta 2005, proizvodi koji spadaju
pod “elektronsku i električnu opremu” ne mogu više biti odbačeni kao običan otpad
i proizvođači ove opreme biće prinuđeni da uzmu natrag ove proizvode na kraju
njihovog uobičajenog veka trajanja. MSI će poštovati zahtev o preuzimanju ovakvih
proizvoda kojima je istekao vek trajanja, koji imaju MSI oznaku i koji su prodati u EU.
Ove proizvode možete vratiti na lokalnim mestima za prikupljanje.
POLSKI
Aby chronić nasze środowisko naturalne oraz jako rma dbająca o ekologię, MSI
przypomina, że...
Zgodnie z Dyrektywą Unii Europejskiej (“UE”) dotyczącą odpadów produktów elek-
trycznych i elektronicznych (Dyrektywa 2002/96/EC), która wchodzi w życie 13 sier-
pnia 2005, tzw. “produkty oraz wyposażenie elektryczne i elektroniczne “ nie mogą
być traktowane jako śmieci komunalne, tak więc producenci tych produktów będą
zobowiązani do odbierania ich w momencie gdy produkt jest wycofywany z użycia.
MSI wypełni wymagania UE, przyjmując produkty (sprzedawane na terenie Unii Eu-
ropejskiej) wycofywane z użycia. Produkty MSI będzie można zwracać w wyznac-
zonych punktach zbiorczych.

Preface ▍MS-96D2
vii
Preface ▍MS-96D2
TÜRKÇE
Çevreci özelliğiyle bilinen MSI dünyada çevreyi korumak için hatırlatır:
Avrupa Birliği (AB) Kararnamesi Elektrik ve Elektronik Malzeme Atığı, 2002/96/EC
Kararnamesi altında 13 Ağustos 2005 tarihinden itibaren geçerli olmak üzere, elek-
trikli ve elektronik malzemeler diğer atıklar gibi çöpe atılamayacak ve bu elektonik
cihazların üreticileri, cihazların kullanım süreleri bittikten sonra ürünleri geri topla-
makla yükümlü olacaktır. Avrupa Birliği’ne satılan MSI markalı ürünlerin kullanım
süreleri bittiğinde MSI ürünlerin geri alınması isteği ile işbirliği içerisinde olacaktır.
Ürünlerinizi yerel toplama noktalarına bırakabilirsiniz.
ČESKY
Záleží nám na ochraně životního prostředí - společnost MSI upozorňuje...
Podle směrnice Evropské unie (“EU”) o likvidaci elektrických a elektronických
výrobků 2002/96/EC platné od 13. srpna 2005 je zakázáno likvidovat “elektrické
a elektronické výrobky” v běžném komunálním odpadu a výrobci elektronických
výrobků, na které se tato směrnice vztahuje, budou povinni odebírat takové výrobky
zpět po skončení jejich životnosti. Společnost MSI splní požadavky na odebírání
výrobků značky MSI, prodávaných v zemích EU, po skončení jejich životnosti. Tyto
výrobky můžete odevzdat v místních sběrnách.
MAGYAR
Annak érdekében, hogy környezetünket megvédjük, illetve környezetvédőként fel-
lépve az MSI emlékezteti Önt, hogy ...
Az Európai Unió („EU”) 2005. augusztus 13-án hatályba lépő, az elektromos és elek-
tronikus berendezések hulladékairól szóló 2002/96/EK irányelve szerint az elektro-
mos és elektronikus berendezések többé nem kezelhetőek lakossági hulladékként,
és az ilyen elektronikus berendezések gyártói kötelessé válnak az ilyen termékek
visszavételére azok hasznos élettartama végén. Az MSI betartja a termékvisszavé-
tellel kapcsolatos követelményeket az MSI márkanév alatt az EU-n belül értékesített
termékek esetében, azok élettartamának végén. Az ilyen termékeket a legközelebbi
gyűjtőhelyre viheti.
ITALIANO
Per proteggere l’ambiente, MSI, da sempre amica della natura, ti ricorda che….
In base alla Direttiva dell’Unione Europea (EU) sullo Smaltimento dei Materiali
Elettrici ed Elettronici, Direttiva 2002/96/EC in vigore dal 13 Agosto 2005, prodotti
appartenenti alla categoria dei Materiali Elettrici ed Elettronici non possono più es-
sere eliminati come riuti municipali: i produttori di detti materiali saranno obbligati
a ritirare ogni prodotto alla ne del suo ciclo di vita. MSI si adeguerà a tale Direttiva
ritirando tutti i prodotti marchiati MSI che sono stati venduti all’interno dell’Unione
Europea alla ne del loro ciclo di vita. È possibile portare i prodotti nel più vicino
punto di raccolta.

viii
Preface ▍MS-96D2
TABLE OF CONTENTS
Copyright Notice�����������������������������������������������������������������������������������ii
Trademarks �������������������������������������������������������������������������������������������ii
Revision History �����������������������������������������������������������������������������������ii
Technical Support �������������������������������������������������������������������������������� ii
Safety Instructions ������������������������������������������������������������������������������iii
FCC-B Radio Frequency Interference Statement ����������������������������� iv
WEEE Statement�����������������������������������������������������������������������������������v
Chapter 1 Overview���������������������������������������������������������������������������1-1
Mainboard Specications............................................................................ 1-2
Mainboard Layout ....................................................................................... 1-4
Block Diagram............................................................................................. 1-5
Chapter 2 Hardware Setup����������������������������������������������������������������2-1
Quick Components Guide........................................................................... 2-2
CPU (Central Processing Unit) ................................................................... 2-3
Memory ....................................................................................................... 2-7
Power Supply.............................................................................................. 2-9
Back Panel I/O .......................................................................................... 2-10
Connectors................................................................................................ 2-11
Jumper ...................................................................................................... 2-16
Slot............................................................................................................ 2-17
Chapter 3 BIOS Setup �����������������������������������������������������������������������3-1
Entering Setup ............................................................................................ 3-2
The Menu Bar ............................................................................................. 3-4
Main ............................................................................................................ 3-5
Advanced .................................................................................................... 3-6
Chipset...................................................................................................... 3-13
Boot........................................................................................................... 3-15
Security ..................................................................................................... 3-16
Save & Exit................................................................................................ 3-17
Server Mgmt.............................................................................................. 3-18
▍

1-1-1
Thank you for choosing the MS-96D2 v1.X, an excellent
server board from MSI.
Based on the innovative Intel®Ibexpeak chipset for opti-
mal system efciency, the MS-96D2 accommodates the
latest Intel® Clarkdale / Lynneld processor in LGA1156
package and supports up to 4 DDR3 800(for rigistered
memory)/1066/1333 DIMM slots to provide the maximum
of 16GB(unbuffered) / 32GB(rigistered) capacity.
In the advanced-level and mid-range market segment,
the MS-96D2 can provide a high-performance solution
for today’s server, as well as in the future.
Chapter 1
Overview

1-2
Overview ▍
MS-96D2
Overview ▍MS-96D2
Mainboard SpecificationS
Processor Support
Intel® Clarkdale / Lynneld processor in LGA1156 package.
Chipset
Intel®Ibexpeak chipset
Memory Support
For Rigistered Memory
4 DDR3 800/1066/1333 DIMM slots (240-pin / 1.5V)
Max 32GB (only for Lynneld)
Support Dual Channels
For Unbuffered Memory
4 DDR3 1066/1333 DIMM slots (240-pin / 1.5V)
Max 16GB (for Clarkdale or Lynneld)
Support Dual Channels
LAN
Gigabit Fast Ethernet by Intel 82578DM
Gigabit Fast Ethernet by Intel 82574L
Graphics
Integrated by Intel® Ibexpeak chipset and Aspeed AST1100 chipset
Onboard 8MB Video SDRAM
Hardware Management
Controlled by ADT7490
SATA
6 SATAII (SATA0~5) ports by Intel®Ibexpeak
Supports storage and data transfers at up to 3 Gb/s
RAID
SATA0~5 support RAID 0 / 1
Connectors
Back Panel
1 PS/2 keyboard port
1 PS/2 mouse port
2 USB 2.0 ports
1 Serial port
1 VGA port
2 LAN ports
Onboard Pinheaders/ Connectors/ Jumpers
1 Serial port pinheader
1 VGA control pinheader
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Overview ▍MS-96D2
1-3
Overview ▍MS-96D2
4 USB 2.0 connectors
6 SATAII connectors
1 Power SMBUS connector (Optional)
1 IPMB connector (Optional)
1 Front Panel pinheader
1 SPI Flash ROM pinheader (for debugging)
1 Clear CMOS jumper
1 Chassis Intrusion connector
1 TPM Module connector
1 Front Panel ID pinheader
1 Recovery jumper
Slot
1 PCI-Express x16 slot
1 PCI-Express x8 slot (with x4 signal)
2 PCI slots, support 3.3V/ 5V PCI bus Interface
Dimension
243mm x 243mm
Mounting
8 mounting holes
System Management
SMBus (I2C)
Temperature, voltage and fan monitors
Power Management Features
ACPI 2.0
APM 1.2
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1-4
Overview ▍MS-96D2
Overview ▍MS-96D2
Mainboard Layout

Overview ▍MS-96D2
1-5
Overview ▍MS-96D2
bLock diagraM
M/B Block Diagram
PCH
Intel Ibexpeak
PCH
Intel Ibexpeak
PCIe2(x16) PCIe2(x16) 16GB/s
Intel®
Processor
Intel®
Processor
DMI 2GB/s
PCIe(x1) GBE PHY
MAC
1ch
PCIe2(x4)4GB/s
PCIe (x4)*
Form Factor : Micro ATX
6 layers
6x USB2.0 (2x Rear, 4x Internal)
SIO
SMSC
SCH5617
LPC
SPI Flash
SPI
Hankswilk
82578
PCI
*Mechanical x8 Intel FDI
+DUWZHOO
/
PCIe(x1) *%(/$1&KLS
[36.%06
[&203RUW5HDUSLQKHDGHU
[5-
CPU
Lynnfield & Clarkdale
LGA1156 (Socket H1)
Memory
Unbuffered DIMM/ Register DIMM
Features
ECC, Dual Channel
6x SATA2* (for HDD, Tape and ODD)
(RAID0/1;SW RAID)
*Single Port Connector
PCI
PCI32/33 133MB/s
Aspeed AST1100
TPM Pin Header

2-2-1
This chapter provides you with the information about
hardware setup procedures. While doing the installa-
tion, be careful in holding the components and follow the
installation procedures. For some components, if you
install in the wrong orientation, the components will not
work properly.
Use a grounded wrist strap before handling computer
components. Static electricity may damage the compo-
nents.
Chapter 2
Hardware Setup

2-2
Hardware Setup ▍MS-96D2
Hardware Setup ▍MS-96D2
Quick coMponentS guide
DIMM Slots,
p.2-7
JPWR1,
p.2-9
JPWR2,
p.2-9
JTPM1,
p.2-15
JCOM2,
p.2-11
Back Panel I/O,
p.2-10
SYS_FAN3,
p.2-11
CPU_FAN1,
p.2-11
SYS_FAN1,
p.2-11
SYS_FAN2,
p.2-11
J_CMOS1,
p.2-16
JUSB1~4,
p.2-12
SATA0~5,
p.2-13
JCASE1,
p.2-14
JFP1, p.2-15
JSMBUS1,
p.2-14
JIPMB1,
p.2-14
J_VGA1,
p.2-16
JID1,
p.2-12
Slots,
p.2-17
CPU,
p.2-3
J3, p.2-16

Hardware Setup ▍MS-96D2
2-3
Hardware Setup ▍MS-96D2
cpu (centraL proceSSing unit)
When you are installing the CPU, make sure to install the cooler to prevent over-
heating. If you do not have the CPU cooler, consult your dealer before turning on
the computer.
For the latest information about CPU, please visit http://www.msi.com/index.
php?func=cpuform2
Important
Overheating
Overheating will seriously damage the CPU and system. Always make sure the
cooling fan can work properly to protect the CPU from overheating. Make sure
that you apply an even layer of thermal paste (or thermal tape) between the CPU
and the heatsink to enhance heat dissipation.
Replacing the CPU
While replacing the CPU, always turn off the ATX power supply or unplug the
power supply’s power cord from the grounded outlet rst to ensure the safety of
CPU.
Overclocking
This mainboard is designed to support overclocking. However, please make
sure your components are able to tolerate such abnormal setting, while doing
overclocking. Any attempt to operate beyond product specications is not
recommended. We do not guarantee the damages or risks caused by inadequate
Introduction to LGA 1156 CPU
The pin-pad side of LGA 1156 CPU. The surface of LGA 1156 CPU. Remem-
ber to apply some thermal paste on it for
better heat dispersion.
Alignment Key
Yellow triangle is the Pin 1 indicator
Alignment Key
Yellow triangle is the Pin 1 indicator

2-4
Hardware Setup ▍MS-96D2
Hardware Setup ▍MS-96D2
CPU & Cooler Installation
When you are installing the CPU, make sure the CPU has a cooler attached on the top
to prevent overheating. Meanwhile, do not forget to apply some thermal paste on CPU
before installing the heat sink/cooler fan for better heat dispersion.
Follow the steps below to install the CPU & cooler correctly. Wrong installation will
cause the damage of your CPU & mainboard.
Open the load level. 1. Lift the load lever up to fully open
position
2.
The CPU socket has a plastic cap on
it to protect the contact from damage.
Before you install CPU, always cover
it to protect the socket pin. Romove
the cap (as the arrow shows).
3. After con󰘰rming the CPU direction for
correct mating, put down the CPU in
the socket housing frame. Be sure to
grasp on the edge of the CPU base.
Note that the alignment keys are
matched.
4.
Alignment Key

Hardware Setup ▍MS-96D2
2-5
Hardware Setup ▍MS-96D2
Visually inspect if the CPU is seated
well into the socket. If not, take out
the CPU with pure vertical motion
and reinstall.
5. Engage the load lever while pressing
down lightly onto the load plate.
6.
Secure the lever near the hook end
under the retention tab.
7. Make sure the four hooks are in
porper position before you install the
cooler.
8.
Important
Conrm if your CPU cooler is rmly installed before turning on your system.
Do not touch the CPU socket pins to avoid damaging.
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•
Alignment Key

2-6
Hardware Setup ▍MS-96D2
Hardware Setup ▍MS-96D2
Mainboard
Hook
Important
Read the CPU status in BIOS.
Whenever CPU is not installed, always protect your CPU socket pin with the plastic
cap covered (shown in Figure 1) to avoid damaging.
Mainboard photos shown in this section are for demonstration of the CPU/ cooler in-
stallation only. The appearance of your mainboard may vary depending on the model
you purchase.
Please refer to the documentation in the CPU fan package for more details about the
CPU fan installation.
•
•
•
•
Align the holes on the mainboard with
the heatsink. Push down the cooler
until its four clips get wedged into the
holes of the mainboard.
9. Press the four hooks down to fasten
the cooler.
10.
Turn over the mainboard to con󰘰rm
that the clip-ends are correctly in-
serted.
11. Finally, attach the CPU Fan cable to
the CPU fan connector on the main-
board.
12.