Seco COM-Express CCOMe-C79 User manual

CCOMe-C79
Carrier Board for COM-Express Type 7 Module
on ATX form factor

CCOMe-C79
CCOMe-C79 - Rev. First Edition: 1.0 - Last Edition: 1.0 - Author: A.R. - Reviewed by E.S. Copyright © 2021 SECO S.p.A.
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All rights reserved. All information contained in this manual is proprietary and confidential material of SECO S.p.A.
Unauthorised use, duplication, modification or disclosure of the information to a third-party by any means without prior consent of SECO S.p.A. is prohibited.
Every effort has been made to ensure the accuracy of this manual. However, SECO S.p.A. accepts no responsibility for any inaccuracies, errors or omissions herein.
SECO S.p.A. reserves the right to change precise specifications without prior notice to supply the best product possible.
For further information on this module or other SECO products, but also to get the required assistance for any and possible issues, please contact us using the
dedicated web form available at https://www.seco.com/ (registration required).
Our team is ready to assist you.
Revision
Date
Note
Rif
1.0
2nd August 2021
First release
AR
REVISION HISTORY

CCOMe-C79
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INDEX
INTRODUCTION.......................................................................................................................................................................... 5
1.1 Warranty...............................................................................................................................................................................................................................6
1.2 Information and assistance.....................................................................................................................................................................................................7
1.3 RMA number request.............................................................................................................................................................................................................7
1.4 Safety...................................................................................................................................................................................................................................8
1.5 Electrostatic Discharges.........................................................................................................................................................................................................8
1.6 RoHS compliance .................................................................................................................................................................................................................8
1.7 Safety Policy.........................................................................................................................................................................................................................9
1.8 Terminology and definitions ..................................................................................................................................................................................................10
1.9 Reference specifications......................................................................................................................................................................................................12
OVERVIEW ................................................................................................................................................................................13
2.1 Introduction.........................................................................................................................................................................................................................14
2.2 Technical Specifications.......................................................................................................................................................................................................15
2.3 Electrical Specifications........................................................................................................................................................................................................16
Smart Battery SM Bus Connector..................................................................................................................................................................................18
RTC Battery ................................................................................................................................................................................................................18
Power Rails meanings..................................................................................................................................................................................................19
2.4 Mechanical Specifications....................................................................................................................................................................................................20
2.5 Block Diagram.....................................................................................................................................................................................................................21
CONNECTORS..........................................................................................................................................................................22
3.1 Connectors placement.........................................................................................................................................................................................................23
3.2 Connectors overview...........................................................................................................................................................................................................25
Connectors list............................................................................................................................................................................................................25
Jumpers and switch list................................................................................................................................................................................................26
3.3 Connectors description........................................................................................................................................................................................................27
COM Express module connectors...............................................................................................................................................................................27
PCI-e Slots..................................................................................................................................................................................................................35
PCI-e x16 Slot / PEG (PCI Express Graphics x16) Connector ..........................................................................................................................................42
eSPI/LPC Debug Connector.........................................................................................................................................................................................46
RS232 ports Internal pin Headers..................................................................................................................................................................................47

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USB ports...................................................................................................................................................................................................................48
S-ATA Connectors.......................................................................................................................................................................................................51
Feature pin Header......................................................................................................................................................................................................52
External BIOS SPI Flash header.....................................................................................................................................................................................53
BIOS disable signals....................................................................................................................................................................................................54
FuSa Header...............................................................................................................................................................................................................55
GPIO pin header / microSD Card Slot............................................................................................................................................................................57
Front Panel Header......................................................................................................................................................................................................58
External EEPROM I2C Flash socket...............................................................................................................................................................................59
POST Code Display.....................................................................................................................................................................................................59
JTAG Connector..........................................................................................................................................................................................................59
FAN Connector ...........................................................................................................................................................................................................60
BMC Connector..........................................................................................................................................................................................................61
Networking..................................................................................................................................................................................................................63
Buttons.......................................................................................................................................................................................................................67
Appendices ...............................................................................................................................................................................68
4.1 Thermal Design...................................................................................................................................................................................................................69
4.2 Accessories........................................................................................................................................................................................................................70

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•Warranty
•Information and assistance
•RMA number request
•Safety
•Electrostatic Discharges
•RoHS compliance
•Safety Policy
•Terminology and definitions
•Reference specifications

CCOMe-C79
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1.1Warranty
This product is subject to the Italian Law Decree 24/2002, acting European Directive 1999/44/CE on matters of sale and warranties to consumers.
The warranty on this product lasts 1 year.
Under the warranty period, the Supplier guarantees the buyer assistance and service for repairing, replacing or credit of the item, at the Supplier’s own discretion.
Shipping costs that apply to non-conforming items or items that need replacement are to be paid by the customer.
Items cannot be returned unless previously authorised by the supplier.
The authorisation is released after completing the specific form available on the web-site https://www.seco.com/eu/support/online-rma.html (Online RMA). The RMA
Authorisation number must be put both on the packaging and on the documents shipped with the items, which must include all the accessories in their original
packaging, with no signs of damage to, or tampering with, any returned item.
The error analysis form identifying the fault type must be completed by the customer and must accompany the returned item.
If any of the above mentioned requirements for RMA is not satisfied, the item will be shipped back and the customer will have to pay any and all shipping costs.
Following after a technical analysis, the supplier will verify if all the requirements for which a warranty service applies are met. If the warranty cannot be applied, the
Supplier will calculate the minimum cost of this initial analysis on the item and the repair costs. Costs for replaced components will be calculated separately.
Warning!
All changes or modifications to the equipment not explicitly approved by SECO S.p.A. could impair the equipment’s functionality and could void
the warranty.

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1.2Information and assistance
What do I have to do if the product is faulty?
SECO S.p.A. offers the following services:
•SECO website: visit https://www.seco.com to receive the latest information on the product. In most cases it is possible to find useful information to solve the
problem.
•SECO Sales Representative: the Sales Rep can help to determine the exact cause of the problem and search for the best solution.
•SECO Help-Desk: contact SECO Technical Assistance. A technician is at disposal to understand the exact origin of the problem and suggest the correct
solution. E-mail: technical.service@seco.com
Fax (+39) 0575 340434
•Repair centre: it is possible to send the faulty product to the SECO Repair Centre. In this case, follow this procedure:
oReturned items must be accompanied by a RMA Number. Items sent without the RMA number will be not accepted.
oReturned items must be shipped in an appropriate package. SECO is not responsible for damages caused by accidental drop, improper usage, or
customer neglect.
Note: Please have the following information before asking for technical assistance:
-Name and serial number of the product;
-Description of Customer’s peripheral connections;
-Description of Customer’s software (operating system, version, application software, etc.);
-A complete description of the problem;
-The exact words of every kind of error message encountered.
1.3RMA number request
To request a RMA number, please visit SECO’s web-site. On the home page, please select “RMA Online”and follow the procedure described.
A RMA Number will be released within 1 working day (only for on-line RMA requests).

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1.4Safety
The CCOMe-C79 board uses only extremely-low voltages.
While handling the board, please use extreme caution to avoid any kind of risk or damages to electronic components.
1.5Electrostatic Discharges
The CCOMe-C79 board, like any other electronic product, is an electrostatic sensitive device: high voltages caused by static electricity could damage some or all
the devices and/or components on-board.
1.6RoHS compliance
The CCOMe-C79 board is designed using RoHS compliant components and is manufactured on a lead-free production line. It is therefore fully RoHS compliant.
Always switch the power off, and unplug the power supply unit, before handling the board and/or connecting cables or other boards.
Avoid using metallic components - like paper clips, screws and similar - near the board when connected to a power supply, to avoid
short circuits due to unwanted contacts with other board components.
If the board has become wet, never connect it to any external power supply unit or battery.
Check carefully that all cables are correctly connected and that they are not damaged.
Whenever handling a CCOMe-C79 board, ground yourself through an anti-static wrist strap. Placement of the board on an anti-static
surface is also highly recommended.

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1.7Safety Policy
In order to meet the safety requirements of EN62368-1:2014 standard for Audio/Video, information and communication technology equipment, the CCOMe-C79
Carrier Board shall be:
-used inside a fire enclosure made of non-combustible material or V-1 material
-used inside an enclosure provided with the symbol IEC 60417-5041(element 1a according to clause 9.5.2 of the IEC 62368-1) on the external part;
-installed inside an enclosure compliant with all applicable IEC 62368-1 requirements;
The manufacturer which includes a CCOMe-C79 Carrier Board in his end-user product shall:
-verify the compliance with B.2 and B.3 clauses of the EN62368-1 standard when the module works in its own final operating condition
-prescribe temperature and humidity range for operating, transport and storage conditions;
-prescribe to perform maintenance on the board only when it is off and has already cooled down;
-prescribe that the connections from or to the board have to be compliant to ES1 requirements;
-the board in its enclosure must be evaluated for temperature and airflow considerations.

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1.8Terminology and definitions
ACPI Advanced Configuration and Power Interface, an open industrial standard for the board’s devices configuration and power management
BIOS Basic Input / Output System, the Firmware Interface that initializes the board before the OS starts loading
CEC Consumer Electronics Control, an HDMI feature which allows controlling more devices connected together by using only one remote control
DDC Display Data Channel, a kind of I2C interface for digital communication between displays and graphics processing units (GPU)
DP Display Port, a type of digital video display interface
DVI Digital Visual interface, a type of digital video display interface
eDP embedded Display Port, a type of digital video display interface developed especially for internal connections between boards and digital displays
GbE Gigabit Ethernet
Gbps Gigabits per second
GND Ground
GPI/O General purpose Input/Output
HD Audio High Definition Audio, most recent standard for hardware codecs developed by Intel®in 2004 for higher audio quality
HDMI High Definition Multimedia Interface, a digital audio and video interface
I2C Bus Inter-Integrated Circuit Bus, a simple serial bus consisting only of data and clock line, with multi-master capability
JTAG Joint Test Action Group, common name of IEEE1149.1 standard for testing printed circuit boards and integrated circuits through the Debug port
LPC Bus Low Pin Count Bus, a low speed interface based on a very restricted number of signals, deemed to management of legacy peripherals
LVDS Low Voltage Differential Signalling, a standard for transferring data at very high speed using inexpensive twisted pair copper cables, usually used
for video applications
Mbps Megabits per second
N.A. Not Applicable
N.C. Not Connected
OS Operating System
PCI-e Peripheral Component Interface Express
PWM Pulse Width Modulation
PWR Power
SATA Serial Advance Technology Attachment, a differential half duplex serial interface for Hard Disks
SD Secure Digital, a memory card type
SDIO Secure Digital Input/Output, an evolution of the SD standard that allows use the use of the same SD interface to drive different Input/Output

CCOMe-C79
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devices, like cameras, GPS, Tuners and so on
SIM Subscriber Identity Module, a card which stores all data of the owner necessary to allow him accessing to mobile communication networks
SM Bus System Management Bus, a subset of the I2C bus protocol dedicated to communication with devices for system management, like a smart battery
and other power supply-related devices
SPI Serial Peripheral Interface, a 4-Wire synchronous full-duplex serial interface which is composed of a master and one or more slaves, individually
enabled through a Chip Select line
TBM To be measured
TMDS Transition-Minimized Differential Signalling, a method for transmitting high speed serial data, normally used on DVI and HDMI interfaces
TTL Transistor-transistor Logic
UIM User Identity Module, an extension of SIM modules.
USB Universal Serial Bus
V_REF Voltage reference Pin

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1.9Reference specifications
Here below it is a list of applicable industry specifications and reference documents.
Reference
Link
ACPI
http://www.acpi.info
Com Express
https://www.picmg.org/openstandards/com-express/
Com Express Carrier Design Guide
https://www.picmg.org/wp-content/uploads/PICMG_COMDG_2.0-RELEASED-2013-12-061.pdf
DDC
https://www.vesa.org/
DP, eDP
https://www.vesa.org/
Ethernet
http://standards.ieee.org/about/get/802/802.3.html
HD Audio
http://www.intel.com/content/dam/www/public/us/en/documents/product-specifications/high-definition-audio-specification.pdf
HDMI
http://www.hdmi.org/index.aspx
I2C
http://www.nxp.com/docs/en/user-guide/UM10204.pdf
Intel®Front Panel I/O connectivity DG
http://www.formfactors.org/developer/specs/A2928604-005.pdf
LPC Bus
http://www.intel.com/design/chipsets/industry/lpc.htm
LVDS
http://www.ti.com/lit/ug/snla187/snla187.pdf
PCI Express
http://www.pcisig.com/specifications/pciexpress
SATA
https://www.sata-io.org
SD Card Association
https://www.sdcard.org
SM Bus
http://www.smbus.org/specs
TMDS
http://www.latticesemi.com/view_document?document_id=38351
USB 2.0 and USB OTG
http://www.usb.org/developers/docs/usb20_docs/usb_20_080117.zip
USB 3.0
http://www.usb.org/developers/docs/usb_31_080117.zip

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2.1Introduction
CCOMe-C79 is a carrier board, designed in ATX form factor, intended for the use with COM-Express Type 7 CPU modules.
COM-Express is an open industry standard defined specifically for COMs (computer on modules). Its definition provides the ability to make a smooth transition from
legacy parallel interfaces to the newest technologies based on serial buses available today.
COM Express CPU modules integrate all the core components of a typical PC-like architecture, and make all interface available through two standardized
connectors, so that COM Express modules become scalable. This means that once an application has been created, there is the ability to diversify the product
range through the use of different performance class or form factor size modules.
Baseboard designers can use just the I/O interfaces that really need, providing, on the carrier board, the routing to the adequate interface connectors.
This versatility allows the designer to create a dense and optimised package, which results in a more reliable product while simplifying system integration.
CCOMe-C79 board can be used both as an evaluation module, to test the functionality of your COM-Express module and design an application specific carrier
board for it, or as a complete carrier board, already suited for standard purposes, with a small space consumption.
In any case, the solutions so realised is fully scalable, and allows to the user to keep his own-designed system continuously up-to-date, since the system can be
updated simply replacing the COM-Express module with a newer one, just unplugging the module and replacing it, without the need of redesigning it.
The robust thermal and mechanical concept, combined with extended power-management capabilities, is perfectly suited for all applications.

2.2Technical Specifications
Supported Modules
COM Express Type 7 compliant modules
Mass Storage interfaces
2x SATA 7p M connectors
µSD Card slot (interface multiplexed with GPIO header)
Networking
1x RJ-45 connector
4x 10Gbase-KR interfaces on OCP Type-C connector
4x MDIO / I2C interfaces on internal pin header
4x SDP interfaces on SMA RF connectors
USB
4 x USB 3.1 Host ports on Dual Type-A sockets
PCI-e
2x PCI-e x4 Slots
1x PCI-e x8 Slot
1x PCI-e x16 Slot
Serial Ports
2 x RS-232 ports on dedicated pin header (from module)
Other Interfaces
BMC connector with SM Bus, I2C, LPC, 1x USB 2.0, 1x PCI-e x1, NCSI signals
4 x GPI + 4 x GPO pin header (interface multiplexed with µSD slot)
SPI Flash Socket
Button / LEDs front panel header
4-pin tachometric FAN connector
I2C + SM Bus on feature Pin header
I2C Flash Socket
SM Bus Smart Battery Connector
4 x 7-segment LCD displays for POST codes
LPC/eSPI internal header
USB Overcurrent header
JTAG connector
FuSa header
SPI Flash header
Buzzer
Power supply: ATX 24 poles connector for carrier board working only
Auxiliary 12V connector for carrier board working only
12 VDC power in connector for COM Express
Coin-cell holder for RTC
Operating temperature: 0°C ÷ +60°C * (Commercial version)
Dimensions: 305x244mm (
* Temperature ranges indicated mean that all components available onboard
are certified for working with a Tcase included in these temperature ranges.
This means that it is customer
’
s responsibility to ensure that all components
’
Tcases remain in the range above indicated. Please also check paragraph
4.1.

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2.3Electrical Specifications
CCOMe-C79 board needs to be supplied using a standard ATX Power Supply, which can, however, also be configured to work in AT mode.
Power Connector CN10 is type Molex Mini-Fit Jr. connector,
p/n 39-28-1243, or equivalent, with the pin-out indicated in the
table here on the left (it is the standard 24-pin ATX pin-out).
Mating Connector, MOLEX p/n 39-01-2240 or equivalent, with
female crimp terminal MOLEX series 5566.
PS_ON#: this signal is present only if the board is configured, via CN11 and J2, to work in
ATX mode. If working in AT mode, this pin is connected directly to Ground.
Power connector can be set to work in ATX mode or AT mode by using dedicated jumpers
CN11 and J2, which are a standard pin headers, P2.54mm, 1x3 pin.
The board has an Auxiliary Power connector CN7 providing +12V_RUN for the carrier board section
only, in case multiple PCI-e modules are connected.
CN7 is 6-poles connector, type MOLEX mini-Fit Jr. p/n 39-28-1063 or equivalent.
Mating Connector, MOLEX p/n 39-01-2060 or equivalent, with female crimp terminal
MOLEX series 5566.
ATX / AT Power Connector CN10
Pin
Signal
Pin
Signal
1
+3.3V_RUN
13
+3.3V_RUN
2
+3.3V_RUN
14
---
3
GND
15
GND
4
+5V_RUN
16
PS_ON#
5
GND
17
GND
6
+5V_RUN
18
GND
7
GND
19
GND
8
PWR_OK_ATX
20
---
9
+5V_ALW
21
+5V_RUN
10
+12V_RUN
22
+5V_RUN
11
+12V_RUN
23
+5V_RUN
12
+3.3V_RUN
24
GND
CN11 position
J2 position
Power mode
2-3
Not Care
AT mode
1-2
1-2
ATX mode
1-2
2-3
AT mode
Auxiliary Power Connector CN7
Pin
Signal
Pin
Signal
1
+12V_RUN
5
GND
2
+12V_RUN
6
GND
3
+12V_RUN
7
GND

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The board has a CPU Power Connector CN8 providing +12V_RUN for the COM Express module
only.
CN8 is a Molex Mini-Fit jr. 8 poles connector, p/n 39-28-1083 or equivalent.
Mating Connector, MOLEX p/n 39-01-2080 or equivalent, with female crimp
terminal MOLEX series 5566.
The use of wires with section 18 AWG is recommended, in order to ensure the proper amperage of the power section.
The power consumption on +5V_ALW can be monitored by removing 2 way jumper
JP2 and inserting a tester set as ammeter.
Alternatively, the consumption on +5V_ALW can be monitored by inserting a tester set as
ammeter between pin 1 and 2 of +5V_ALW Sense Connector CN4.
CN4 is a dedicated 2 position Wire to Board Terminal Block, type Wurth p/n 691210910002.
The COM Express card edge connector has a PWR_OK signal from main power supplied by
Carrier Board to the module, indicating that all the power supplies to the Module are stable within
specified ranges. The Module will typically not power up until the PWR_OK signal goes active.
CN3 is a standard pin header, P2.54mm, 1x3 pin, dedicated to manage this power
status signal for the Module. For normal operation, set the jumper in 1-2 position, otherwise set in 2-3 position to fix its level high and have it always activated.
Diode LED D17 is present on Carrier Board to notify the system has been correctly powered-up, directly driven through an High-Speed Buffer by PWR_OK signal.
Another diode LED D16, complementary to D17, is used to notify the Reset Output from Module to Carrier Board, directly driven through an High-Speed Buffer by
CB_RESET# signal.
CPU Power Connector CN8
Pin
Signal
Pin
Signal
1
GND
5
+12V_RUN
2
GND
6
+12V_RUN
3
GND
7
+12V_RUN
4
GND
8
+12V_RUN
JP2 position
+5V_ALW Current monitor selector
Not inserted
Current measurement enabled
Inserted
Current measurement disabled
CN3 position
Power Ok management
1-2
PSU PWR_OK enabled
2-3
PWR_OK always high

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Smart Battery SM Bus Connector
The SM bus coming from COM Express module is carried directly both to the
Feature header (see par.3.3.8) and to a JST 4-pin connector CN29, p/n B4B-PH-K-
S(LF)(SN), or equivalent, which can be used for the connection of external Smart
battery controllers. Pinout as indicated in the left table.
SB_SMB_CLK: Smart Battery System Management bus bidirectional clock line,
+3.3V_ALW electrical level with derived by SMB_CK signal
SB_SMB_DAT: Smart Battery System Management bus bidirectional data line, +3.3V_ALW derived by SMB_DAT signal
SMB_ALERT#: System Management Bus Alert, active low input to the module that can be used to generate an Interrupt or to wake the system
RTC Battery
For the occurrences when the System (Carrier board + COM Express module) is not powered with an external power supply, on board there is a RTC Coin Cell
Battery holder CN9, for the use of standard coin battery type CR2032 with a nominal capacity of 220mAh, to supply, with a 3V voltage, the Real Time Clock and
CMOS memory mounted on the COM Express module.
The batteries should only be replaced with devices of the same type. Always check the orientation before inserting and make sure that they are aligned correctly and
are not damaged or leaking.
Never allow the batteries to become short-circuited during handling. Batteries supplied with C79 board are compliant to requirements of European Directive
2006/66/EC regarding batteries and accumulators. When putting out of order C79 board, remove the batteries from the board in order to collect and dispose them
according to the requirement of the same European Directive above mentioned. Even when replacing the batteries, the disposal has to be made according to these
requirements.
It is possible to monitor the consumption on VCC_RTC battery by removing the jumper from CN6
connector and inserting a tester in series set as ammeter between 2-3 position.
Alternatively, the consumption on VCC_RTC can be monitored by inserting a tester set as ammeter
between pin 1 and 2 of RTC Battery Sense Connector CN5.
CN5 is a dedicated 2 position Wire to Board Terminal Block, type Wurth p/n 691210910002
RTC battery can be enabled/disabled using dedicated jumper on CN6, which is a standard pin header, P2.54mm, 1x3 pin.
Smart Battery SM Bus Connector CN29
Pin
Signal
Pin
Signal
1
SB_SMB_CLK
3
SMB_ALERT#
2
SB_SMB_DAT
4
GND
CN6 position
RTC Battery enable
1-2
Battery disconnected
2-3
Battery connected
NO jumper
Current measurement
CAUTION: handling batteries incorrectly or replacing with not-approved devices may present a risk of fire or explosion.

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The RTC battery voltage level is monitored through a comparator inside the board. Battery
low status signal (BATLOW#) is carried to COM-express module to be managed.
JP1 is a 2-way jumper to enable/disable this indicator.
Power Rails meanings
In all the tables contained in this manual, Power rails are named with the following meaning:
_RUN: Switched voltages, i.e. power rails that are active only when the board is in ACPI s S0 (Working) state. Examples: +3.3V_RUN, +5V_RUN.
_ALW: Always-on voltages, i.e. power rails that are active both in ACPIs S0 (Working), S3 (Standby) and S5 (Soft Off) state. Examples: +5V_ALW, +3.3V_ALW.
JP1 position
Battery Low Indicator enable
Not inserted
Indicator disabled
Inserted
Indicator enabled

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2.4Mechanical Specifications
According to ATX form factor, board dimensions are 305 x 244 mm (12”x 9.6”).
The printed circuit of the board is made of twelve layers, some of them are ground planes, for disturbance rejection.
In order to fix the COM Express module to the carrier
board, on CCOMe-C79 have been soldered sixmetallic
spacers, height 8mm, 2.5mm diameter.
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