Themis RES-22XR3 User manual

RES-22XR3
RES-22XR3
Installation
Manual
Installation
Manual
2RU 19” Rack-Mount Rugged Enterprise Server with
X8DTH-iF/X8DTH-6F Motherboard Configuration/
Two Quad/Dual-Core 5500 or Quad/Six-Core 5600 Xeon CPUs
Configuration 1
Configuration 1

RES-22XR3 - Configuration 1
RES-22XR3 - Configuration 1
Two Quad/Dual-Core 5500 or Quad/Six-Core 5600 Xeon CPUs
RES-22XR3 - Configuration 1
RES-22XR3 - Configuration 1
Two Quad/Dual-Core 5500 or Quad/Six-Core 5600 Xeon CPUs
RES-22XR3 - Configuration 1
RES-22XR3 - Configuration 1
Two Quad/Dual-Core 5500 or Quad/Six-Core 5600 Xeon CPUs
RES-22XR3 - Configuration 1
RES-22XR3 - Configuration 1
Two Quad/Dual-Core 5500 or Quad/Six-Core 5600 Xeon CPUs
RES-22XR3 - Configuration 1
RES-22XR3 - Configuration 1
Two Quad/Dual-Core 5500 or Quad/Six-Core 5600 Xeon CPUs
RES-22XR3 - Configuration 1
RES-22XR3 - Configuration 1
Two Quad/Dual-Core 5500 or Quad/Six-Core 5600 Xeon CPUs
RES-22XR3 - Configuration 1
RES-22XR3 - Configuration 1
Two Quad/Dual-Core 5500 or Quad/Six-Core 5600 Xeon CPUs
RES-22XR3 - Configuration 1
RES-22XR3 - Configuration 1
Two Quad/Dual-Core 5500 or Quad/Six-Core 5600 Xeon CPUs

Themis Computer—Rest of World
5 Rue Irene Joliot-Curie
38320 Eybens, France
Phone [phone]
Fax [phone]
Themis Computer—Americas and Pacific Rim
47200 Bayside Parkway
Fremont, CA 94538
Phone [phone]
Fax [phone]
World Wide Web http://www.themis.com
RES-22XR3InstallationManual
-Configuration1*
Version 1.3—April2012
* SuperMicro Motherboards X8DTH-iF / X8DTH-6F

Copyright © 2012 Themis Computer, Inc.
ALL RIGHTS RESERVED. No part of this publication may be reproduced in any form, by
photocopy, microfilm, retrieval system, or by any other means now known or hereafter invented without
the prior written permission of Themis Computer.
The information in this publication has been carefully checked and is believed to be accurate. However,
Themis Computer assumes no responsibility for inaccuracies. Themis Computer retains the right to
make changes to this publication at any time without prior notice. Themis Computer does not assume
any liability arising from the application or use of this publication or the product(s) described herein.
RESTRICTED RIGHTS LEGEND: Use, duplication, or disclosure by the United States Government
is subject to the restrictions set forth in DFARS 252.227-7013 (c)(1)(ii) and FAR 52.227-19.
TRADEMARKS and SERVICEMARKS
Themis®is a registered trademark of Themis Computer, Inc.
Intel® and Xeon®are registered trademarks of Intel Corporation.
Red Hat®is a registered trademark of Red Hat, Inc.
Linux®is a registered trademark of Linus Torvalds.
SuperMicro®is a registered trademark of Super Micro Computer, Inc.
All other trademarks, service marks, or registered trademarks used in this publication are the property of
their respective owners.
CE Marking
This product complies with the European EMC Directive (2004/108/EC) and the European Low Voltage
Safety Directive (2006/95/EC)/.
Safety Precautions
Instructions regarding safety precautions during installation, operation, or maintenance of the equipment
are given in the section entitled “Safety Instructions” on page v.
WARNINGS and CAUTIONS
The definitions of WARNINGS and CAUTIONS as used in this document are given in the Preface in
the section entitled “Notes, Cautions, Warnings, and Sidebars”.
RES-22XR3 Installation Manual - Configuration 1, Version 1.3
April 2012
Part Number: 116789-024
Themis Customer Support
North America, South America, and Pacific Rim
Telephone: [phone]
Fax: [phone]
E-mail: [e-mail]
Web Site: http://www.themis.com

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RES-22XR3 Installation Manual - Configuration 1
VersionRevisionHistory
Version 1.3 ...................................................................................... April 2012
• Fixed page numbering error occurring in the appendices.
• Fixed page numbering error occurring in the roman numeral pages.
• Added the manual P/N throughout the manual for easier reference.
• Removed removed power cord retainer bracket from “Accessory Kit”, page 1-
19, as this is an option item.
• Added “5600” to the CPU description in Figure 1-2, page 1-3.
• Added text regarding SAS/storage drive support in Figure 1-3, page 1-4.
• Corrected power fail LED color in Figure 1-4, page 1-5.
• Added slot locations to Table 1-1, page 1-2.
• Changed max operating temperature to 55°C in Table 1-2, page 1-2 and in
Table 1-6, page 1-15.
• Added note regarding max storage drives per chassis in Figure 1-3, page 1-4.
• Updated text in “Chipset Overview”, page 1-10.
• Added information about SuperDoctor in “PC Health Monitoring”, page 1-11.
• Added additional text to note in “Environmental Temperature Control”, page 1-
11 regarding unobstructed airflow to the chassis.
• Added note to “Main Switch Override Mechanism”, page 1-13 stating all RES
units leave the factory with ATX compliant power supplies installed.
• Added “Winbond WPCM450 Controller”, page 1-14.
• Adjusted the typical input power in Table 1-7, page 1-16 and added footnotes.
• Correct the symbol for the LED “off state” in Table 1-3, page 1-7.
• Added three new systems and weights to Table 1-8, page 1-20.
• Corrected all references to the fans being 60-mm (actual size is 80-mm).
• Updated section, “Removable 80-mm Fan”, page 2-12.
• Added text regarding proper order of DIMM installation.
• Corrected CPU socket description in Figure 2-3, page 2-5.
• Added clarifying text regarding proper drive orientation during installation in
“Storage-Drive Installation”, page 2-11.
• Added note stating the X8DTH motherboards have onboard graphics capability
in section, “Configuration”, page 2-19.
• Added text stating the chassis power button behavior can be adjusted in the
BIOS settings (“Turning the System Off”, page 2-19).
• Assorted minor edits and changes throughout the manual.
• Updated “BIOS Setup Utility”, page 3-1 according to current SuperMicro rev.
• Updated Appendix F, “Re-packaging Instructions” with added packaging detail.

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RES-22XR3 Installation Manual - Configuration 1 Version 1.3
Version 1.2....................................................................................August 2011
• Added P/N 118188 to the manual matrix in Table 2 on page xxiii.
• Modified footnote for Table 1-2, page 1-2. Added clarity regarding SAS/SATA
support.
•AddedTable 1-3, page 1-7 describing LED behaviors related to the power sup-
ply modules.
• Revised Chapter 1.3 on page 10 to reflect the current specs for the
X8DTH-iF/6F motherboard.
• Updated Chapter 3, "BIOS Setup Utility" to reflect latest AMI BIOS Version.
• Updated figures in Appendix B, “Rack-Mount Slide Installation” to reflect cur-
rent chassis design.
•AddedAppendix E, “Optional RES Audio/USB/Serial Port Module” and moved
existing Appendix E to Appendix F.
• Assorted minor edits and changes throughout the manual.
Version 1.1.............................................................................. December 2010
• Added figures of both Standard and Front-I/O RES-32 Chassis in Preface.
•AddedTable 2 and Table 3 in the Preface.
• Added section on noise listed under 1.8.3 Environmental.
• Colorized block diagram for the X8DTH-iF/6F in Chapter 1.
• Added note in 1.8.2.1 System Power in regards to the wattage of pre installed
power supplies.
• Included Caution note under Section 1.9 Packaging and Shipping.
•AddedTable 1-8 showing the Approximate Weights of the RES Series in Chap-
ter 1.
• Added Appendices D and E.
• Added Version number to the header of all even pages.
• Assorted minor edits and changes throughout the manual.
• Added footnote in Table 2 stating that the RES XR3 17.07”-Deep chassis mod-
els would be referred to as 17”-Deep.
Version 1.0 ....................................................................................... March 2010

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RES-22XR3 Installation Manual - Configuration 1
Safety Instructions
To maximize user safety and ensure correct device operation, all instructions con-
tained in this section should be read carefully.
• The device must be used in accordance with the instructions for use.
• Electrical installations in the room must correspond to the requirements of
respective regulations.
• Take care that there are no cables, particularly mains cables, in areas where
persons can trip over them.
• Do not use a mains connection in sockets shared by a number of other power
consumers. Do not use an extension cable.
• Only use the mains cable supplied.
• The unit is completely disconnected from the power source only when the
power cord is disconnected from the power source. Therefore the power cord
and its connectors must always remain easily accessible.
• Do not set up the device in the proximity of heat sources or in a damp location.
Make sure the device has adequate ventilation.
• All connection cables must be screwed or locked to the chassis housing.
• The device is designed to be used in horizontal position only.
• The device is no longer safe to operate when
— the device has visible damage or
— the device no longer functions.
• In these cases, the device must be shut down and secured against unintentional
operation.
• Repairs may only be carried out by a person authorized by Themis Computer.
• The device may only be opened for the installation and removal of extension
(PCI) cards, memory modules, storage drives, fan housings, power supplies,
Caution: It is important that the user observe all warnings and instructions
that are on the device and contained in this manual.

vi Themis Computer
RES-22XR3 Installation Manual - Configuration 1 Version 1.3
and the lithium battery—all in accordance with the instructions given in this
manual.
• If extensions are made to the device, the legal stipulations and the device spec-
ifications must be observed.
• The device must be switched off when removing the top cover; for example,
before installing extension (PCI) cards.
Operation of Laser Source Devices
DVD/CD-ROM drives contain laser light-emitting diodes (classified in accordance
with IEC 825-1:1993: LASER CLASS 1) and, therefore, must not be opened.
If the enclosure of such a drive is opened, invisible laser radiation is emitted. Do
not allow yourself to be exposed to this radiation.
The laser system meets the code of Federal Regulations 21 CFR,1040 for the USA
and Canadian Radiation Emitting Devices Act, REDR C 1370.
Electrostatic Discharge (ESD)
A sudden discharge of electrostatic electricity can destroy static-sensitive devices
or micro-circuitry. Proper packaging and grounding techniques are necessary pre-
cautions to prevent damage. Always take the following precautions:
1. Transport boards in static-safe containers such as boxes or bags.
2. Keep electrostatic-sensitive parts in their containers until they arrive at static-
free stations.
3. Always be properly grounded when touching a sensitive board, component, or
assembly.
4. Store electrostatic-sensitive boards in protective packaging or on conductive
foam.
Grounding Methods
Guard against electrostatic damage at workstations by following these steps:
1. Cover workstations with approved anti-static material. Provide a wrist strap
connected to a work surface and properly grounded tools and equipment.

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2. Use anti-static mats, heel straps, or air ionizers to give added protection.
3. Handle electrostatic-sensitive components, boards, and assemblies by the case
or the PCB edge.
4. Avoid contact with pins, leads, or circuitry.
5. Turn off power and input signals before inserting and removing connectors or
test equipment.
6. Keep the work area free of non-conductive materials such as ordinary plastic as-
sembly aids and Styrofoam.
7. Use field service tools, such as cutters, screwdrivers, and vacuums that are con-
ductive.
8. Always place drives and boards PCB-assembly-side down on the foam.
Instructions for the Lithium Battery
Systems are equipped with a lithium battery installed on the motherboard. To
replace this battery, please observe the instructions that are described in this man-
ual.
Warning: There is a danger of explosion when the wrong type of battery is used
as a replacement.

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Table of Contents
Version Revision History....................................................................................................... iii
Safety Instructions...................................................................................................................v
Preface................................................................................................................................... xxi
1. Overview and Specifications ........................................................................................ 1-1
1.1 Overview ................................................................................................................ 1-1
1.2 System LEDs and I/O Connectors ......................................................................... 1-5
1.3 Chipset Overview ................................................................................................ 1-10
1.3.1 The 5500/5600 Series Processor and 5520 Chipset ................................. 1-10
1.4 Special Features ................................................................................................... 1-11
1.4.1 Recovery from AC Power Loss ............................................................... 1-11
1.5 PC Health Monitoring .......................................................................................... 1-11
1.5.1 Fan Status Monitor with Firmware Control ............................................. 1-11
1.5.2 Environmental Temperature Control ....................................................... 1-11
1.5.3 System Resource Alert ............................................................................. 1-12
1.6 ACPI Features ...................................................................................................... 1-12
1.6.1 Slow Blinking LED for Suspend-State Indicator .................................... 1-12
1.6.2 Main Switch Override Mechanism .......................................................... 1-13
1.7 Super I/O Controller ............................................................................................ 1-13
1.8 Winbond WPCM450 Controller .......................................................................... 1-14
1.9 Specifications ....................................................................................................... 1-15
1.9.1 General ..................................................................................................... 1-15
1.9.2 Electrical .................................................................................................. 1-16
1.9.2.1 System Power ........................................................................... 1-16
1.9.2.2 Output Voltage .......................................................................... 1-16
1.9.3 Environmental .......................................................................................... 1-17
1.9.3.1 Shock ........................................................................................ 1-17
1.9.3.2 Electrostatic Discharge ............................................................. 1-17
1.9.3.3 Noise ......................................................................................... 1-17

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RES-22XR3 Installation Manual - Configuration 1 Version 1.3
1.10 Packaging and Shipping ....................................................................................... 1-19
1.10.1 Accessory Kit ........................................................................................... 1-19
1.10.2 Rack-Mount Slides (Optional) ................................................................. 1-20
2. Installation and Operation ........................................................................................... 2-1
2.1 Installation Procedures ........................................................................................... 2-1
2.1.1 Remove Protective Top Cover ................................................................... 2-1
2.1.2 Memory Modules ....................................................................................... 2-3
2.1.2.1 Installation .................................................................................. 2-4
2.1.3 PCI Cards ................................................................................................... 2-7
2.1.3.1 Installing Cards ........................................................................... 2-7
2.1.4 Lithium Battery .......................................................................................... 2-8
2.1.4.1 Removing the Lithium Battery ................................................... 2-8
2.1.4.2 Installing a Lithium Battery ........................................................ 2-9
2.1.5 SAS/SATA II Storage Drive ...................................................................... 2-9
2.1.5.1 Opening the RES-22XR3 Front Doors ....................................... 2-9
2.1.5.2 Storage-Drive Removal ............................................................ 2-10
2.1.5.3 Storage-Drive Installation ......................................................... 2-11
2.1.6 Removable 80-mm Fan ............................................................................ 2-12
2.1.6.1 Removing and Installing a 80-mm Fan ..................................... 2-13
2.1.7 Power Supply ........................................................................................... 2-14
2.1.7.1 Removing a Power Supply ....................................................... 2-14
2.1.7.2 Installing a Power Supply .........................................................2-16
2.2 Rack Mounts ........................................................................................................ 2-17
2.2.1 Mounting Brackets ................................................................................... 2-17
2.2.2 Rack-Mount Slides (Optional) ................................................................. 2-17
2.3 Operation ............................................................................................................. 2-18
2.3.1 Plugging in the AC Power Cords ............................................................. 2-18
2.3.2 Turning the System On ............................................................................2-18
2.3.3 Getting Started ......................................................................................... 2-19
2.3.3.1 Configuration ............................................................................ 2-19
2.3.3.2 Linux Installation ...................................................................... 2-19
2.3.4 Turning the System Off ........................................................................... 2-19
3. BIOS Setup Utility ........................................................................................................ 3-1
3.1 Introduction ............................................................................................................ 3-1
3.1.1 Starting BIOS Setup Utility ....................................................................... 3-1
3.1.2 How To Change the Configuration Data ................................................... 3-2

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3.1.3 Starting the Setup Utility ........................................................................... 3-2
3.2 Main Setup ............................................................................................................. 3-3
3.2.1 System Time/System Date ......................................................................... 3-3
3.2.2 Supermicro X8DTH ................................................................................... 3-4
3.2.3 Processor .................................................................................................... 3-4
3.2.4 System Memory ......................................................................................... 3-4
3.3 Advanced Setup Configurations ............................................................................ 3-5
3.3.1 Boot Features ............................................................................................. 3-5
3.3.1.1 Quick Boot .................................................................................. 3-5
3.3.1.2 Quiet Boot ................................................................................... 3-5
3.3.1.3 AddOn ROM Display Mode ....................................................... 3-6
3.3.1.4 Bootup Num-Lock ...................................................................... 3-6
3.3.1.5 Wait For 'F1' If Error .................................................................. 3-6
3.3.1.6 Hit 'Del' Message Display ........................................................... 3-6
3.3.1.7 Interrupt 19 Capture .................................................................... 3-6
3.3.1.8 Watch Dog Function ................................................................... 3-6
3.3.1.9 Power Button Function ............................................................... 3-6
3.3.1.10 Restore on AC Power Loss ......................................................... 3-7
3.3.2 Processor and Clock Options ..................................................................... 3-7
3.3.2.1 CPU Ratio ................................................................................... 3-7
3.3.2.2 Clock Spread Spectrum .............................................................. 3-7
3.3.2.3 Hardware Prefetcher ................................................................... 3-7
3.3.2.4 Adjacent Cache Line Prefetch .................................................... 3-7
3.3.2.5 MPS and ACPI MADT Ordering ............................................... 3-8
3.3.2.6 Machine Checking Feature ......................................................... 3-8
3.3.2.7 Intel® Virtualization Technology ............................................... 3-8
3.3.2.8 Execute-Disable Bit Capability .................................................. 3-8
3.3.2.9 Simultaneous Multi-Threading ................................................... 3-8
3.3.2.10 Active Processor Cores ............................................................... 3-9
3.3.2.11 Intel® EIST Technology ............................................................. 3-9
3.3.2.12 Intel® TurboMode Technology .................................................. 3-9
3.3.2.13 C1E Support ................................................................................ 3-9
3.3.2.14 Intel® C-STATE Tech ................................................................ 3-9
3.3.2.15 C-State package limit setting ...................................................... 3-9
3.3.2.16 C1 Auto Demotion ...................................................................... 3-9
3.3.2.17 C3 Auto Demotion .................................................................... 3-10
3.3.2.18 ACPI T State ............................................................................. 3-10
3.3.3 Advanced Chipset Control ....................................................................... 3-10

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RES-22XR3 Installation Manual - Configuration 1 Version 1.3
3.3.3.1 QPI Links Speed ....................................................................... 3-10
3.3.3.2 QPI Frequency .......................................................................... 3-10
3.3.3.3 QPI L0s and L1 ......................................................................... 3-10
3.3.3.4 Memory Frequency ................................................................... 3-10
3.3.3.5 Memory Mode .......................................................................... 3-11
3.3.3.6 Demand Scrubbing ................................................................... 3-11
3.3.3.7 Patrol Scrubbing ....................................................................... 3-11
3.3.3.8 Channel Interleave .................................................................... 3-11
3.3.3.9 Bank Interleave ......................................................................... 3-11
3.3.3.10 Throttling - Closed Loop .......................................................... 3-11
3.3.3.11 Intel I/OAT ............................................................................... 3-12
3.3.3.12 DCA Technology ...................................................................... 3-12
3.3.3.13 DCA Prefetch Delay ................................................................. 3-12
3.3.3.14 Intel VT-d ................................................................................. 3-12
3.3.3.15 Active State Power Management .............................................. 3-12
3.3.3.16 IOH PCI-E Max Payload Size ..................................................3-12
3.3.3.17 USB Functions .......................................................................... 3-13
3.3.3.18 USB 2.0 Controller ................................................................... 3-13
3.3.3.19 Legacy USB Support ................................................................ 3-13
3.3.3.20 Port 64/60 Emulation ................................................................ 3-13
3.3.4 IDE/SATA Configuration ........................................................................ 3-13
3.3.4.1 SATA#1 Configuration ............................................................. 3-13
3.3.4.2 Configure SATA#1 as .............................................................. 3-13
3.3.4.3 ICH RAID Code Base ............................................................... 3-14
3.3.4.4 ICH AHCI Code Base ............................................................... 3-14
3.3.4.5 SATA#2 Configuration ............................................................. 3-14
3.3.4.6 IDE Detect Timeout (sec) ......................................................... 3-14
3.3.4.7 Primary IDE Master/Slave, Secondary IDE Master/Slave,
Third IDE Master, and Fourth IDE Master ............................... 3-14
3.3.5 PCI/PnP Configuration ............................................................................ 3-17
3.3.5.1 Clear NVRAM .......................................................................... 3-17
3.3.5.2 Plug & Play OS ......................................................................... 3-17
3.3.5.3 PCI Latency Timer .................................................................... 3-17
3.3.5.4 PCI Cache Size ......................................................................... 3-17
3.3.5.5 PCI IDE BusMaster .................................................................. 3-17
3.3.5.6 SR-IOV Supported .................................................................... 3-17
3.3.5.7 PCI-E Slots 1~7 x8 ................................................................... 3-18
3.3.5.8 Onboard LAN Options ROM Select ......................................... 3-18

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Table of Contents
3.3.5.9 Load Onboard LAN1 Option ROM/Load Onboard
LAN2 Option ROM .................................................................. 3-18
3.3.5.10 Load Onboard SAS Option ROM ............................................. 3-18
3.3.5.11 Boot Graphics Adapter Priority ................................................ 3-18
3.3.6 Super IO Device Configuration ............................................................... 3-18
3.3.6.1 Serial Port1 Address/Serial Port2 Address ............................... 3-18
3.3.6.2 Serial Port 2 Attribute ............................................................... 3-19
3.3.7 Remote Access Configuration ................................................................. 3-19
3.3.7.1 Remote Access .......................................................................... 3-19
3.3.7.2 Serial Port Number ................................................................... 3-19
3.3.7.3 Serial Port Mode ....................................................................... 3-19
3.3.7.4 Flow Control ............................................................................. 3-19
3.3.7.5 Redirection After BIOS POST ................................................. 3-19
3.3.7.6 Terminal Type ........................................................................... 3-20
3.3.7.7 VT-UTF8 Combo Key Support ................................................ 3-20
3.3.7.8 Sredir Memory Display Delay .................................................. 3-20
3.3.8 Hardware Health Monitor ........................................................................ 3-20
3.3.8.1 CPU Overheat Alarm ................................................................ 3-20
3.3.8.2 CPU 1 Temperature/CPU 2 Temperature/
System Temperature ................................................................. 3-21
3.3.8.3 Voltage Readings ...................................................................... 3-23
3.3.9 ACPI Configuration ................................................................................. 3-23
3.3.9.1 ACPI Aware O/S ...................................................................... 3-23
3.3.9.2 ACPI Version Features ............................................................. 3-23
3.3.9.3 ACPI APIC Support .................................................................. 3-23
3.3.9.4 APIC ACPI SCI IRQ ................................................................ 3-23
3.3.9.5 Headless Mode .......................................................................... 3-23
3.3.9.6 High Performance Event Timer ................................................ 3-24
3.3.9.7 NUMA Support ......................................................................... 3-24
3.3.9.8 WHEA Support ......................................................................... 3-24
3.3.10 Trusted Computing .................................................................................. 3-24
3.3.10.1 TCG/TPM (Trusted Platform Module) Support ....................... 3-24
3.3.11 IPMI Configuration .................................................................................. 3-25
3.3.11.1 IPMI Firmware Revision .......................................................... 3-25
3.3.11.2 Status of BMC .......................................................................... 3-25
3.3.12 View BMC System Event Log ................................................................ 3-26
3.3.12.1 Clear BMC System Event Log ................................................. 3-26
3.3.13 Set LAN Configuration ............................................................................ 3-26

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3.3.13.1 Channel Number ....................................................................... 3-26
3.3.13.2 Channel Number Status ............................................................ 3-27
3.3.13.3 IP Address Source ..................................................................... 3-27
3.3.13.4 BMC Watch Dog Timer Action ................................................ 3-27
3.3.14 Event Log Configuration ......................................................................... 3-28
3.3.14.1 View Event Log ........................................................................ 3-28
3.3.14.2 Mark all events as read ............................................................. 3-28
3.3.14.3 Clear event log .......................................................................... 3-28
3.3.14.4 PCI Error Log ........................................................................... 3-28
3.3.14.5 Memory ECC Error Log ........................................................... 3-28
3.4 Security Settings .................................................................................................. 3-29
3.4.1 Supervisor Password ................................................................................ 3-29
3.4.2 User Password .......................................................................................... 3-29
3.4.3 Change Supervisor Password ................................................................... 3-29
3.4.4 User Access Level ................................................................................... 3-30
3.4.5 Change User Password ............................................................................ 3-30
3.4.6 Clear User Password ................................................................................ 3-30
3.4.7 Password Check ....................................................................................... 3-30
3.4.8 Boot Sector Virus Protection ................................................................... 3-30
3.5 Boot Configuration .............................................................................................. 3-31
3.5.1 Boot Device Priority ................................................................................ 3-31
3.5.2 Storage Drives .......................................................................................... 3-31
3.5.3 Removable Drives .................................................................................... 3-32
3.5.4 CD/DVD Drives ...................................................................................... 3-32
3.5.4.1 Retry Boot Devices ................................................................... 3-32
3.6 Exit Options ......................................................................................................... 3-33
3.6.1 Save Changes and Exit ............................................................................ 3-33
3.6.2 Discard Changes and Exit ........................................................................ 3-33
3.6.3 Discard Changes ...................................................................................... 3-34
3.6.4 Load Optimal Defaults ............................................................................. 3-34
3.6.5 Load Fail-Safe Defaults ...........................................................................3-34
3.7 BIOS Recovery .................................................................................................... 3-35
3.7.1 How to Recover the AMIBIOS Image (Main BIOS Block) .................... 3-35
3.7.2 Boot Sector Recovery from a USB Device ............................................. 3-35
3.7.3 Boot Sector Recovery from an IDE CD-ROM ........................................ 3-36
3.7.4 Boot Sector Recovery from a Serial Port (“Serial Flash”) ...................... 3-36
3.7.4.1 Requirements ............................................................................ 3-36

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Table of Contents
Appendix A. Connector Pinouts ...................................................................................... A-1
A.1 PS/2 Keyboard and Mouse ................................................................................... A-1
A.2 USB Ports ............................................................................................................. A-2
A.3 Serial Ports ............................................................................................................ A-2
A.4 SVGA Monitor Port .............................................................................................. A-3
A.5 Gigabit Ethernet LAN Port ................................................................................... A-4
A.6 IPMI Dedicated LAN Port .................................................................................... A-4
Appendix B. Rack-Mount Slide Installation ...................................................................B-1
Appendix C. Red Hat Enterprise Linux 5 Installation ..................................................C-1
C.1 Introduction ............................................................................................................C-1
C.2 Installation .............................................................................................................C-1
Appendix D. Optional Remote On/Off Switch .............................................................. D-1
D.1 Remote On/Off Configuration .............................................................................. D-1
D.2 Remote On-Only Configuration ........................................................................... D-2
D.3 Ordering the Remote On/Off Switch .................................................................... D-2
Appendix E. Optional RES Audio/USB/Serial Port Module ........................................E-1
E.1 RES Audio/USB/Serial Port Custom Module .......................................................E-1
E.1.1 Attach I/O Cables .......................................................................................E-3
E.1.2 Connector Pinouts ......................................................................................E-4
E.1.2.1 USB Ports A and B .....................................................................E-4
E.1.2.2 Serial Port COM1 .......................................................................E-5
E.1.2.3 Stereo Audio Ports (Optional) ....................................................E-6
E.2 Ordering the RES Audio/USB/Serial Port Custom Module ..................................E-7
Appendix F. Re-packaging Instructions .........................................................................F-1
F.1 Re-packaging for Shipment ...................................................................................F-1
F.2 Packaging Components ..........................................................................................F-2
F.3 Instructions for Re-packaging ................................................................................F-3
Index ..............................................................................................................................Index-1
Reader Comment Card

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RES-22XR3 Installation Manual - Configuration 1 Version 1.3

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Themis Computer
Table of Contents
List of Figures
Figure 1 Rugged Enterprise Server Model RES-22XR3 (Doors Removed)................... xxi
Figure 2 Front View of a Standard Rear-I/O RES-22 Chassis (Doors Removed)........ xxiv
Figure 3 Rear View of a Standard Rear-I/O RES-22 Chassis.........................................xxv
Figure 4 Front View of a Front-I/O RES-22 Chassis......................................................xxv
Figure 5 Rear View of a Front-I/O RES-22 Chassis.......................................................xxv
Figure 1-1 RES-22XR3 (Front Doors Installed) ............................................................... 1-1
Figure 1-2 X8DTH-iF/X8DTH-6F Motherboard Block Diagram .................................... 1-3
Figure 1-3 External Features of the RES-22 (Front and Rear).......................................... 1-4
Figure 1-4 RES-22 System LEDs and I/O Connectors (Configuration 1) ........................ 1-5
Figure 1-5 Major Components of the RES-22 (Open Top View)..................................... 1-6
Figure 1-6 RES-22XR3 with Front Sound Baffle Installed (Front View) ...................... 1-17
Figure 1-7 RES-22XR3 with Rear Sound Baffle Installed (Rear View)......................... 1-18
Figure 2-1 Remove the RES-22XR3 Protective Access Cover......................................... 2-2
Figure 2-2 Remove Air-Flow Deflector Screws................................................................ 2-4
Figure 2-3 Memory Module Slot Locations...................................................................... 2-5
Figure 2-4 Memory Module Removal............................................................................... 2-6
Figure 2-5 PCI Card Installation, Configuration 1............................................................ 2-7
Figure 2-6 PCI Card Clamp............................................................................................... 2-7
Figure 2-7 The RES-22XR3 Lithium Battery and Socket................................................. 2-8
Figure 2-8 Opening the RES-22XR3 Front Bezel Doors.................................................. 2-9
Figure 2-9 Unlocking the RES-22XR3 Storage Drives (Front Doors Removed)........... 2-10
Figure 2-10 RES-22XR3 Storage Drive Removal ............................................................ 2-11
Figure 2-11 The RES-22XR3 80-mm-Fans....................................................................... 2-12
Figure 2-12 Fan Lid Lock.................................................................................................. 2-13
Figure 2-13 Locking Contact area..................................................................................... 2-14
Figure 2-14 The RES-22XR3 Power Supply Locking Mechanism .................................. 2-15

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Figure 2-15 Right Rack-Mount Bracket............................................................................ 2-17
Figure 2-16 AC Power Socket and LED on the RES-22XR3 Rear................................... 2-18
Figure 2-17 System Power Button and LED on the RES-22XR3 Front ........................... 2-18
Figure 3-1 Main BIOS Setup Screen................................................................................. 3-3
Figure 3-2 Advanced Settings ........................................................................................... 3-5
Figure 3-3 Security Settings ............................................................................................ 3-29
Figure 3-4 Boot Settings.................................................................................................. 3-31
Figure 3-5 Exit Options................................................................................................... 3-33
Figure 3-6 AMI_FLSH HyperTerminal .......................................................................... 3-38
Figure 3-7 ROM File Extraction ..................................................................................... 3-38
Figure 3-8 Flash Recovery .............................................................................................. 3-39
Figure A-1 USB Connector Pinout.................................................................................... A-2
Figure A-2 COM1 Serial Connector ................................................................................. A-2
Figure A-3 RES-22XR3 SVGA Connector Pinout ........................................................... A-3
Figure A-4 Ethernet Connector, Type RJ45...................................................................... A-4
Figure B-1 Screw Locations for Rack-Mount Slides......................................................... B-1
Figure B-2 RES-22XR3 Rack-Mount Slide Installation.................................................... B-3
Figure C-1 Power On after Linux DVD is Inserted into Drive.......................................... C-2
Figure C-2 Skip Key .......................................................................................................... C-2
Figure C-3 Welcome Screen .............................................................................................. C-3
Figure C-4 Language Selection.......................................................................................... C-4
Figure C-5 Selecting Layout Type..................................................................................... C-5
Figure C-6 Enter Installation Number................................................................................ C-6
Figure C-7 Partitioning....................................................................................................... C-7
Figure C-8 Reviewing Option............................................................................................ C-8
Figure C-9 Creating a Custom Layout............................................................................... C-9
Figure C-10 Setting Up Boot Loader................................................................................. C-10
Figure C-11 Master Boot Record (MBR) .......................................................................... C-11