Aaeon GENE-HD05 User manual

SubCompact Board GENE-HD05
GENE-HD05
AMD®G-series T56N/T40E/T40R
Processor
Onboard DDR3 1066/1333 SODIMM
18/24-bit Single/Dual-channel LVDS LCD
8 USB 2.0, 4 COM, 2 SATA, 1 CFast
2 GbE, Mini Card
GENE-HD05 Manual Rev. A 2nd Ed.
January 2013

SubCompact Board GENE-HD05
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Copyright Notice
This document is copyrighted, 2013. All rights are reserved. The
original manufacturer reserves the right to make improvements to the
products described in this manual at any time without notice.
No part of this manual may be reproduced, copied, translated, or
transmitted in any form or by any means without the prior written
permission of the original manufacturer. Information provided in this
manual is intended to be accurate and reliable. However, the original
manufacturer assumes no responsibility for its use, or for any in-
fringements upon the rights of third parties that may result from its
use.
The material in this document is for product information only and is
subject to change without notice. While reasonable efforts have been
made in the preparation of this document to assure its accuracy,
AAEON assumes no liabilities resulting from errors or omissions in
this document, or from the use of the information contained herein.
AAEON reserves the right to make changes in the product design
without notice to its users.

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Acknowledgments
All other products’ name or trademarks are properties of their
respective owners.
AMD®is trademark of Advanced Micro Devices.
Microsoft Windows®is a registered trademark of Microsoft Corp.
ITE is a trademark of Integrated Technology Express, Inc.
IBM, PC/AT, PS/2, and VGA are trademarks of International
Business Machines Corporation.
All other product names or trademarks are properties of their
respective owners.

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Packing List
Before you begin installing your card, please make sure that the
following materials have been shipped:
Product DVD
GENE-HD05
If any of these items are missing or damaged, please contact your
distributor or sales representative immediately.

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Contents
Chapter 1 General Information
1.1 Introduction................................................................... 1-2
1.2 Features....................................................................... 1-3
1.3 Specifications............................................................... 1-4
Chapter 2 Quick Installation Guide
2.1 Safety Precautions....................................................... 2-2
2.2 Location of Connectors and Jumpers .......................... 2-3
2.3 Mechanical Drawing..................................................... 2-5
2.4 List of Jumpers............................................................. 2-7
2.5 List of Connectors ........................................................ 2-8
2.6 Setting Jumpers ......................................................... 2-10
2.7 Touch Screen 4/5/8-Wire Selection (JP1).................. 2-11
2.8 AT/ATX Power Supply Mode Selection-1 (JP2)......... 2-11
2.9 COM2 Pin8 Function Selection (JP3) ........................ 2-11
2.10 Clear CMOS Selection (JP4) ................................... 2-12
2.11 LVDS Backlight Lightness Up/down Selection (JP5)2-12
2.12 LVDS Operating VDD Selection (JP6)..................... 2-12
2.13 LVDS Backlight Lightness Control Mode Selection (JP7)
.......................................................................................... 2-13
2.14 LVDS Backlight Inverter VCC Selection (JP8)......... 2-13
2.15 AT/ATX Power Supply Mode Selection-2 (JP9)....... 2-13
2.16 LPC Port (CN1)........................................................ 2-14

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2.17 Touch Screen Connector (CN2)............................... 2-15
2.18 CPU FAN Connector (CN3)..................................... 2-17
2.19 External +5VSB Input Connector (CN4) .................. 2-18
2.20 External +12V Input Connector (CN5)..................... 2-18
2.21 Front Panel Connector (CN6) .................................. 2-18
2.22 Digital IO Port Connector (CN7)............................... 2-19
2.23 LPT Port Connector (CN8)....................................... 2-20
2.24 COM Port 2 Connector (CN9).................................. 2-21
2.25 COM Port 3 Connector (CN10)................................ 2-23
2.26 COM Port 4 Connector (CN11)................................ 2-24
2.27 USB 2.0 Ports 7 Connector (CN12)......................... 2-25
2.28 USB 2.0 Ports 8 Connector (CN13)......................... 2-25
2.29 USB 2.0 Ports 5 Connector (CN14)......................... 2-26
2.30 USB 2.0 Ports 6 Connector (CN15)......................... 2-26
2.31 USB 2.0 Ports 3 Connector (CN16)......................... 2-27
2.32 USB 2.0 Ports 4 Connector (CN17)......................... 2-27
2.33 Audio I/O Port Connector (CN18).......................... 2-28
2.34 SATA Port1 Connector (CN19)................................ 2-28
2.35 SATA Port2 Connector (CN20)................................ 2-29
2.36 +5V Output for SATA HDD Connector (CN21)........ 2-30
2.37 LVDS Inverter / Backlight Connector (CN22)........... 2-30
2.38 LVDS Port Connector (CN23).................................. 2-31
2.39 COM Port 1 (D-SUB 9) Connector (CN24) .............. 2-32
2.40 Realtek LAN (RJ-45) Port2 Connector (CN25)........ 2-33
2.41 Realtek LAN (RJ-45) Port1 Connector (CN26)........ 2-34

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2.42 USB Port 1 and 2 Connector (CN27)....................... 2-34
2.43 HDMI Port Connector (CN28).................................. 2-35
2.44 PS/2 Keyboard/Mouse Combo Port Connector (CN29)
.......................................................................................... 2-36
2.45 VGA Port Connector (CN30).................................... 2-37
2.46 UIM Card Module Connector (CN32)....................... 2-38
2.47 DDR3 SODIMM Slot (SO-DIMM1)........................... 2-38
2.48 CFast Slot (CFDA1) ................................................. 2-38
2.49 Mini-Card Slot (PCIEA1) .......................................... 2-39
Chapter 3 AMI BIOS Setup
3.1 System Test and Initialization. ..................................... 3-2
3.2 AMI BIOS Setup........................................................... 3-3
Chapter 4 Driver Installation
4.1 Installation.................................................................... 4-3
Appendix A Programming The Watchdog Timer
A.1 Programming ............................................................A-2
A.2 F81866 Watchdog Timer Initial Program……………A-5
Appendix B I/O Information
B.1 I/O Address Map.......................................................B-2
B.2 1st MB Memory Address Map ...................................B-4
B.3 IRQ Mapping Chart...................................................B-5
B.4 DMA Channel Assignments......................................B-7

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Appendix C Mating Connector
C.1 List of Mating Connectors and Cables......................C-2
Appendix D AHCI Setting
D.1 Setting AHCI.............................................................D-2
Appendix E Electrical Specifications for I/O Ports
E.1 Electrical Specifications for I/O Ports........................E-2

SubCompact Board GENE-HD05
Chapter 1 General Information 1- 1
General
Chapter
1
Information

SubCompact Board GENE-HD05
Chapter 1 General Information 1- 2
1.1 Introduction
AAEON announces a brand new 3.5” SubCompcat Board
GENE-HD05, designed to fit in diverse applications that demand for
fitting in different space limitations and high performance.
GENE-HD05 accommodates onboard AMD®G-series™
T56N/T40E/T40R Processor and features DDR3 SODIMM
1066/1333 system memory up to 4GB. Moreover, GENE-HD05
adopts AMD®A50M chipset to achieve an excellent performance.
In addition, GENE-HD05 deploys Realtek®8111E Ethernet chip to
feature two RJ-45 ports onboard to display the transcendent
performance of network connections. The display chipset of
GENE-HD05 supports 18/24-bit dual/single channel LVDS LCD and
HDMI function.
In addition to the Mini Card expansion, this model equips two SATA
and one CFast™ for the storage and eight USB 2.0 ports, four COM
ports, 8-bit Digital I/O for flexible I/O expansion. The GENE-HD05 is
an excellent choice for your vital applications.

SubCompact Board GENE-HD05
Chapter 1 General Information 1- 3
1.2 Features
Onboard AMD®G-series™ T56N/T40E/T40R
Processor, Up to 1.65 GHz
AMD®A50M
DDR3 SODIMM 1066/1333 (T56N) Memory Up to 4 GB
Gigabit Ethernet x 2
18/24-bit Dual/Single Channel LVDS LCD, CRT, HDMI
2CH AC97 2.3 Codec Audio
CFastx 1, mSATA x 1 (Configured by BIOS), SATA
x 2
USB 2.0 x 8, COM x 4, 8-bit Digital I/O
Mini Card Expansion Interfaces Co-lay mSATA
Function
Supports TPM Module (Optional)
Single DC 12V Input For Easy Power Integration

SubCompact Board GENE-HD05
Chapter 1 General Information 1- 4
1.3 Specifications
System
Form Factor 3.5” SubCompact Board
Processor AMD®G-series™
T56N/T40E/T40R Processor
System Memory SODIMM DDR3 1066/1333 Up to
4GB
Chipset AMD
®A50M
I/O Chipset Fintek 81866D
Ethernet 10/100/1000Base-TX (Realtek®
8111E), RJ-45 x 2
BIOS AMI Plug & Play BIOS
Wake On LAN Yes
Watchdog Timer Generates a time-out system reset
H/W Status Monitoring Supports power supply voltages,
fan speed, and temperature
monitoring
Expansion Interface Mini Card connector x 1, TPM
Module (Optional)
Battery Lithium battery
Power Requirement DC 12V
Power Consumption AMD®G-series™ T56N 1.65GHz,
(Typical) DDR3 4GB, 1.73 A @ +12V
Board Size 5.75” x 4” (146mm x 101.6mm)

SubCompact Board GENE-HD05
Chapter 1 General Information 1- 5
Gross Weight 0.88 lb (0.4 Kg)
Operation Temperature 32°F ~ 140°F (0°C ~ 60°C)
Storage Temperature -40°F ~ 176°F (-40°C ~ 80°C)
Operation Humidity 0% ~ 90% relative humidity,
non-condensing
Display: Supports CRT/LVDS/HDMI simultaneous/ dual view
displays
Chipset AMD
®G-series CPU integrated
Resolutions Up to 2560 x 1600 T56N(18W)
1920 x 1200 T40E/T40R
(6.5W/5.5W) for CRT;
Up to 1920x1200 for HDMI;
Up to 1920 x 1200 for dual
channel LVDS
LCD Interface 18/24-bit dual/single channel
LVDS
I/O
Storage SATA6.0 Gb/s x 2, CFastx 1
Serial Port RS-232 x 3, RS-232/422/485 x 1
Parallel Port SPP/EPP/ECP Mode
USB USB2.0 x 8
PS/2 Port Keyboard x 1, Mouse x 1
Digital I/O Supports 8-bit (programmable)
Audio Line-in, Line-out, & Mic-in

SubCompact Board GENE-HD05
Chapter2QuickInstallationGuide2-1
Quick
Installation
Guide
Chapter
2

SubCompact Board GENE-HD05
Chapter 2 Quick Installation Guide 2-2
2.1 Safety Precautions
Always completely disconnect the power cord
from your board whenever you are working on
it. Do not make connections while the power is
on, because a sudden rush of power can
damage sensitive electronic components.
Always ground yourself to remove any static
charge before touching the board. Modern
electronic devices are very sensitive to static
electric charges. Use a grounding wrist strap at
all times. Place all electronic components on a
static-dissipative surface or in a static-shielded
bag when they are not in the chassis

SubCompact Board GENE-HD05
Chapter2QuickInstallationGuide2-3
2.2 Location of Connectors and Jumpers
Component Side
Component Side

SubCompact Board GENE-HD05
Chapter 2 Quick Installation Guide 2-4
Solder Side
Solder Side

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Chapter2QuickInstallationGuide2-5
2.3 Mechanical Drawing
Component Side
Component Side

SubCompact Board GENE-HD05
Chapter 2 Quick Installation Guide 2-6
Solder Side
Solder Side

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Chapter2QuickInstallationGuide2-7
2.4 List of Jumpers
The board has a number of jumpers that allow you to configure your
system to suit your application.
The table below shows the function of each of the board's jumpers:
Label Function
JP1 Touch Screen 4/5/8-wire Mode Selection
JP2 AT/ATX Power Supply Mode Selection-1
JP3 COM2 Pin8 Function Selection
JP4 Clear CMOS Jumper
JP5 LVDS Backlight Lightness Up/Down Selection
JP6 LVDS Operating VDD Selection
JP7 LVDS Backlight Lightness Control Mode
Selection
JP8 LVDS Backlight Inverter VCC Selection
JP9 AT/ATX Power Supply Mode Selection-2