Agilent Technologies InfinityLab LC Series User manual

Agilent Technologies
Agilent InfinityLab LC Series
1260 Infinity II Binary LC
System
Manual and Quick Guide

1260 Infinity II Binary LC System - Manual and Quick Guide
Notices
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Manual Part Number
G7112-90300
Edition
09/2016
Printed in Germany
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1260 Infinity II Binary LC System - Manual and Quick Guide 3
In This Book
In This Book
This book describes the Agilent InfinityLab LC Series 1260 Infinity II Binary
LC system.
1Introduction
This chapter gives an introduction to the Agilent 1260 Infinity II LC, the
underlying concepts and the features of the Agilent 1260 Infinity II LC.
2 Configuration Settings
This chapter describes how to configure the system.
3QuickStartGuide
This chapter provides information on running an Agilent 1260 Infinity II LC.
4 Parts and Consumables
This chapter provides information on additional parts and consumables.
5 Appendix
This chapter provides addition information on safety, legal, and web.

4 1260 Infinity II Binary LC System - Manual and Quick Guide
Contents
Contents
1Introduction 5
Product Description 6
Features of the Agilent 1260 Infinity II Binary LC 7
System Components 8
Solutions 18
Optimizing the Stack Configuration 22
Leak and Waste Handling 28
2 Configuration Settings 35
General Information on LAN Configuration 36
Instrument Configuration 37
Lab Advisor 39
3QuickStartGuide 45
Best Practices 46
Prepare a Run 47
Check Out the System 54
4 Parts and Consumables 65
Tool Kit 66
InfinityLab Quick Connect and Quick Turn Fittings 68
5 Appendix 73
Safety 74
Agilent Technologies on Internet 80

5
1260 Infinity II Binary LC System - Manual and Quick Guide
Agilent Technologies
1
Introduction
Product Description 6
Features of the Agilent 1260 Infinity II Binary LC 7
System Components 8
Binary Pump G7112B 9
Multisampler G7167A 10
Vialsampler G7129A 11
Multicolumn Thermostat G7116A 12
Diode Array Detector HS G7117C 13
Diode Array Detector WR G7115A 14
Variable Wavelength Detector G7114A 15
Fluorescence Detector G7121A 16
Refractive Index Detector G7162A 17
Solutions 18
Walk-up 18
Online SPE 18
1260 Infinity II Multimethod Solution 20
Optimizing the Stack Configuration 22
Agilent InfinityLab LC Flex Bench 22
One Stack Configuration 24
Two Stack Configuration 26
Leak and Waste Handling 28
Waste Guidance 32
Waste Concept 33
This chapter gives an introduction to the Agilent 1260 Infinity II LC, the
underlying concepts and the features of the Agilent 1260 Infinity II LC.

6 1260 Infinity II Binary LC System - Manual and Quick Guide
1 Introduction
Product Description
Product Description
The Agilent 1260 Infinity II LC System is the trusted platform, taking you to
the next level of routine analysis, and giving you the instrument choice to
achieve best operational efficiency.
A broad range of reliable instrumentation matches with latest column
technologies and guarantees robust separation and detection performance.
Highest instrument utilization and a fast turnaround cycle is achieved through
easy column handling and superior sample logistics from sample submission
to data analysis.
The designed for method transferability and stepwise upgrade capability
enables a risk-free integration in current infrastructure matching your budget.

1260 Infinity II Binary LC System - Manual and Quick Guide 7
Introduction
1
Features of the Agilent 1260 Infinity II Binary LC
Features of the Agilent 1260 Infinity II Binary LC
With an operating pressure of up to 600 bar, the 1260 Infinity II Binary Pump
is compatible with HPLC and UHPLC, i.e. handling 2.1, 3, and 4.6 mm ID
columns over the flow rate range (up to 5 mL/min). Gradient formation is
based on a high-pressure mixing principle.
Ultralow carryover – The 1260 Infinity II Multisampler is designed for low
carryover, you can take clean to a whole new level with the multi-wash
capability, cleaning all relevant injection parts between runs. This
sophisticated, integrated feature flushes the injection needle outside with
three solvents, and uses seat back flush procedures to reduce carryover to less
than 9 ppm.
Dual-needle injection – By running samples alternately through one or the
other injection path, you can reduce cycle times to mere seconds, virtually
eliminating conventional wait times—whether for large volume loadings or
flushing procedures.
Higher sample capacity per benchspace – Using shallow well-plate drawers,
the 1260 Infinity II Multisampler takes a maximum load of 16 microtiter plates
and up to 6144 samples—the most of any single system.
Advanced column capacity for up to 4 columns in a single 1260 Infinity II
Multicolumn Thermostat delivering best flexibility for column switching.
Fast and easy connections with InfinityLab Quick Connect fittings to save time
and trouble.
1260 Infinity II DAD HS Detector delivers lower detection limit and higher
data quality for more confidence.
Seamless integration in your chromatography data system: Agilent’s
Instrument Control Framework (ICF) enables smooth control of Agilent LC
instrumentation through third-party chromatography data systems.

8 1260 Infinity II Binary LC System - Manual and Quick Guide
1 Introduction
System Components
System Components
The Agilent 1260 Infinity II Binary LC system consists of the following
components:
•Binary Pump
•Multisampler or Vialsampler
•Multicolumn Thermostat (MCT)
•Diode Array (DAD), Variable Wavelength (VWD), Refractive Index (RID), or
Fluorescence Detector (FLD)
•Evaporative Light Scattering Detector (ELSD) (optional, not stackable)
•Solvent Cabinet
The Agilent 1260 Infinity II Binary LC is described in more detail in the
following sections. All modules (except the optional ELSD) are stackable, see
“Optimizing the Stack Configuration” on page 22.
For specifications, please refer to the individual module user documentation.

1260 Infinity II Binary LC System - Manual and Quick Guide 9
Introduction
1
System Components
Binary Pump G7112B
The Agilent 1260 Infinity II Binary Pump is suited for LC applications using
conventional or superficially porous particles columns, as well as STM column
technology. Gradient formation is based on a high-pressure mixing principle.
Standard or low delay volumes can be easily configured by the user. The
Agilent 1260 Infinity II Binary Pump offers reproducible gradients and
high-performance, providing high-throughput and fast separations. The pump
is suitable for routine applications, with UV or MS detection, where high speed
and resolution with uncompromised data quality are required.
Figure 1 Overview of the pump
Status indicator
Active seal wash
Purge valve
Degasser
Pump head A
Pump head B
Leak drain
Power switch

10 1260 Infinity II Binary LC System - Manual and Quick Guide
1 Introduction
System Components
Multisampler G7167A
The Agilent 1260 Infinity II Multisampler can handle both vials and microtiter
plates with ease and efficiency up to 600 bar system pressure, optimized on
high flexibility.
This compact module can house up to 6144 samples, all inside the Agilent
stack footprint and the robotics to inject each into the chromatograph in turn.
With the multi-wash capability, you can reduce carryover to less than 9 parts
per million.
Figure 2 Overview of the Multisampler
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1260 Infinity II Binary LC System - Manual and Quick Guide 11
Introduction
1
System Components
Vialsampler G7129A
The Agilent 1260 Infinity II Vialsampler is designed for the reliability, safety,
and ease-of-use needed for routine pharmaceutical tasks and quality control,
as well as for environmental and food analyses. It can house optionally the
integrated column compartment for two LC columns with temperature control
up to 80 °C as well as a sample cooler for stable temperatures down to 4 °C, all
within one module.
Figure 3 Overview of the Vialsampler
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12 1260 Infinity II Binary LC System - Manual and Quick Guide
1 Introduction
System Components
Multicolumn Thermostat G7116A
The Agilent 1260 Infinity II Multicolumn Thermostat (MCT) allows precise
column thermostatting over a broad temperature range: from cooling down to
10 degrees below ambient temperature up to 85 °C, providing high flexibility
for optimized speed and selectivity of LC separation.
Ultrahigh pressure valves enable a wide range of applications such as column
selection from 4 columns in a single MCT, sample preparation for analyte
enrichment or matrix removal, alternating column regeneration, etc.
For bio-inert applications bio-inert heat exchangers and a selection of
bio-inert valves are offered.
The MCT fits with all 1260 Infinity II modules and can also be combined with
modules of the Agilent 1260 and 1290 Infinity II Series.
Figure 4 Overview of the Multicolumn Thermostat
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1260 Infinity II Binary LC System - Manual and Quick Guide 13
Introduction
1
System Components
Diode Array Detector HS G7117C
The Agilent 1260 Infinity II Diode Array Detector HS is based on the Agilent
Max-Light cartridge cell with optofluidic waveguides that improve light
transmission to near 100 % efficiency without sacrificing resolution caused by
cell dispersions effects.
With typical detector noise levels of < ±0.6 μAU/cm the 60 mm flow cell gives
up to 10times higher sensitivity than detectors with conventional flow cells.
Any compromising refractive index and thermal effects are almost completely
eliminated, resulting in significantly less baseline drift for more reliable and
precise peak integration.
For fast separations, this detector has multiple wavelength and full spectral
detection at sampling rates up to 120 Hz.
Figure 5 Overview of the detector
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14 1260 Infinity II Binary LC System - Manual and Quick Guide
1 Introduction
System Components
Diode Array Detector WR G7115A
The 1260 Infinity II DAD WR detector is designed for highest optical
performance, GLP compliance, and easy maintenance. With its 120 Hz data
acquisition rate the detector is perfectly suited for fast LC applications. The
long –life deuterium lamps allow highest intensity and lowest detection limits
over a wavelength range of 190 – 950 nm. The use of RFID tags for all flow cells
and UV-lamps provides traceable information about these assemblies.
The built-in holmium oxide filter features the fast wavelength accuracy
verification, while the built-in temperature controls improves the baseline
stability. Additional diagnostic signals for temperature and lamp voltage
monitoring are available.
Figure 6 Overview of the detector
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1260 Infinity II Binary LC System - Manual and Quick Guide 15
Introduction
1
System Components
Variable Wavelength Detector G7114A
The Agilent 1260 Infinity II Variable Wavelength Detector (VWD) is the most
sensitive and fastest detector in its class.
Time-programmable wavelength switching provides sensitivity and selectivity
for your applications.
More sample information can be acquired in the dual wavelength mode.
Low detector noise (<±2.5 μAU) and baseline drift (<1·10
-4
AU/h) facilitates
precise quantification of trace levels components.
High productivity can be achieved with fast analysis at up to 120 Hz data
rates.
Figure 7 Overview of the detector
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16 1260 Infinity II Binary LC System - Manual and Quick Guide
1 Introduction
System Components
Fluorescence Detector G7121A
The proven optical and electronic design of the Agilent 1260 Infinity II
Fluorescence Detector provides highest sensitivity for the analysis of
trace-level components. Time-programmable excitation and emission
wavelength switching allows you to optimize the detection sensitivity and
selectivity for your specific applications. High-speed detection with up to
74 Hz data rates keeping you pace with the analysis speed of fast LC.
Figure 8 Overview of the detector
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1260 Infinity II Binary LC System - Manual and Quick Guide 17
Introduction
1
System Components
Refractive Index Detector G7162A
The Agilent 1260 Infinity II Refractive Index Detector (RID) is the ideal
detector for fast and reliable LC results when routinely analyzing non-UV
absorbing substances, such as carbohydrates, lipids, and polymers.
The 1260 Infinity II RID is also the detector of choice for gel permeation
chromatography (GPC) or size exclusion chromatography (SEC).
Figure 9 Overview of the detector
Status indicator
Interface port area
Service door
Power switch
Leak drain

18 1260 Infinity II Binary LC System - Manual and Quick Guide
1 Introduction
Solutions
Solutions
Walk-up
Agilent's Walkup Software enables simplified access to the power and
precision of high quality LC and LC/MS processes for multiple users.
•Users may simply walk up to an LC/MS system, input basic sample
information and choose from a list of analytical methods or purification
schemes available.
•Sample submitters are prompted where to place their samples. They will
receive their results by e-mail when the samples are completed.
•Managers of multiple instrument installations can take advantage of
networking instruments through an OpenLAB Shared Services Server to
allow administration from anywhere in the lab.
Online SPE
Whether you need to enrich your analytes, remove matrix components, or
lower detection limits for e.g. trace-level water analysis, the highly modular
design of the Agilent 1290 Infinty II Series Online SPE Solution provides you
with the flexibility to tailor your system to match virtually any analytical LC
challenge. Agilents Online SPE Solutions are based on the 1290 Infinity
Flexible Cube that houses re-usable SPE cartridges and up to two valves.
Combined with the Agilent 6400 Series Triple Quadrupole mass spectrometers
the 1200 Infinity Series Online SPE Solution allows ultra-low, trace level
detection.
The Online SPE Starter Kit builds the basis for all possible Online-SPE
solutions. In an alternating way you can clean, condition and load your sample
on one of the cartridges while the second cartridge is in the analytical flow
path for analyzing the sample.
In addition to the Online SPE Starter Set the online SPE direct injection kit
allows also to bypass the SPE cartridges and inject directly onto the analytical
column. With this approach you can use your system either for online SPE
analysis or for a direct injection without re-plumbing the system.

1260 Infinity II Binary LC System - Manual and Quick Guide 19
Introduction
1
Solutions
Figure 10 Position 1
Figure 11 Position 2

20 1260 Infinity II Binary LC System - Manual and Quick Guide
1 Introduction
Solutions
1260 Infinity II Multimethod Solution
This configuration allows to increase your labs' efficiency by combining
hardware for column-selection with solvent selection. Multiple LC
applications using different mobile phases, different gradients, but also
different stationary phases can be performed on just one LC instrument.
Typically, several users share one instrument, nevertheless use their
individual LC methods dedicated to their specific samples. This configuration
is chosen to optimize instrument use.
•By using a high-pressure 4-column selector valve (G4237A, 600 bar) inside
the 1260 Infinity II Multicolumn Thermostat, up to 4 columns (30 cm length
with InfinityLab fittings or shorter) can be accessed without any
re-plumbing. Individual InfinityLab Quick-Connect heat exchangers
support pre-column solvent heating for each column. A bio-inert version of
the 4-column selector valve is also available. Fingertight InfinityLab fittings
allow a fast exchange of columns when needed.
•A solvent selection valve attached to the LC stack allows additional access
of up to 12 different solvents.
•Utilization and productivity of the LC are optimized by switching between
several applications run on a single instrument.