Dynojet Power Commander III User manual

i419-411www.powercommander.com 2006-2007 Yamaha FJR 1300 - PCIII USB - 1
2006-2007 Yamaha FJR 1300
Installation Instructions
Dynojet Research 2191 Mendenhall Drive North Las Vegas, NV 89081 [phone] www.powercommander.com
Parts List
1Power Commander
1USB Cable
1CD-ROM
1Installation Guide
1Power Adapter
2Power Commander Decals
2 Dynojet Decals
2 Velcro®Strip
1Alcohol Swab
You can also download the Power
Commander software and latest maps
from our web site at:
www.powercommander.com
The ignition MUST be turned
OFF before installation!
PLEASE READ ALL DIRECTIONS BEFORE STARTING INSTALLATION
Button Adjustment Display
Faceplate Buttons
Expansion Port USB Port

1Remove the main seat.
2Lift the front of the fuel tank up.
3Place the PCIII in the vicinity of the
tool kit temporarily.
4Route the wiring harness from the
PCIII towards the front of the air box
on the left hand side of the bike.
Route the harness between the fuel
tank and the frame (Fig. A). The
bracket for the fuel tank will need to
be loosened to fit the connectors
through.
5Pull the heatshield back that is on top
of the air box to expose the wiring
harness.
6Unplug the stock connector from the
throttle bodies to the main wiring har-
ness (Fig. B).
7Plug the connectors from the PCIII
in-line of the stock wiring harness and
throttle bodies (Fig. C).
Fig. AFig. B
Fig. C
i419-411 www.powercommander.com 2006-2007 Yamaha FJR 1300 - PCIII USB - 2
Loosen these bolts and
the two on the other side.
Wiring harness from PC
Stock connector
Stock connectors
PCIII connectors

8Route the ground wire to the right
hand side of the throttle bodies.
Route the ground wire under the
frame cross member and above the
radiator.
9Attach the ground wire to the negative
side of the battery (Fig. D).
10 Install the PCIII in the tool kit tray
(Fig. E) using the supplied velcro.
Make sure to clean both surfaces with
the supplied alcohol swab before
attaching velcro.
11 Make sure all wires are routed so that
they will not get pinched.
12 Reinstall the fuel tank and seats.
Note: It is recommended to disconnect the
stock O2 sensor to get the full poten-
tial out of the bike and the Power
Commander. Follow the wires com-
ing out of your exhaust and discon-
nect these wires where it goes into the
main wiring harness.
Fig. DFig. E
i419-411 www.powercommander.com 2006-2007 Yamaha FJR 1300 - PCIII USB - 3
Ground wire from PCIII