Endress+Hauser Analytik Jena UVP Minidizer Manual

81-0169-02 Rev J
UVP Minidizer
Hybridization Oven
Instruction Guide
___________________________________________________________________
Analytik Jena US
2066 W. 11th Street, Upland, CA 91786
Tel: [phone]
Fax: [phone]
Web Site: www.us.analytik-jena.com
Ultra-Violet Products Ltd.
Unit 1, Trinity Hall Farm Estate
Nuffield Road, Cambridge CB4 1TG UK
Tel: [phone] Fax: [phone]

UVP Minidizer Hybridization Oven 2
81-0169-02 Rev J
Table of Contents
Introduction ...................................................................................................................................................................3
Hybridization Oven Specifications..................................................................................................................................4
Installation.....................................................................................................................................................................5
Operation.......................................................................................................................................................................6
Service Procedures .........................................................................................................................................................6
Hybridization Techniques ............................................................................................................................................10

UVP Minidizer Hybridization Oven 3
81-0169-02 Rev J
Introduction
The UVP Minidizer Hybridization Oven is a cost-effective, personal desktop hybridization oven with a capacity of four
35x150mm bottles, eight 50ml or 15ml conical plastic tubes. The Minidizer operates with a state-of-the-art
microprocessor as well as temperature and variable speed controls. The Minidizer enables consistent saturation of
samples, whether it for washing or hybridizing. The bottle carousel rotates at a uniform speed of 12 RPM.
A touch-sensitive keypad and microprocessor provide accurate temperature control from ambient +10°C to 78°C. The
keypad is located below a large LCD readout. Once the desired hybridization temperature is entered, the readout displays
the current temperature inside the chamber. The chamber environment is calibrated at 78°C; at this temperature, the
microprocessor accuracy is ±0.5°C. The uniformity of the chamber at 68°C is ±0.1°C; at 55°C is ±0.1°C; and at 42°C is ±0.1°C.
WARNING!
There may be build up of pressure within the hybridization bottles when they are taken from ambient to hybridization
temperature. To help in relieving some of this pressure, preheat the solutions and bottles. Also, ensure that bottles are
opened at the same temperature as the hybridization process. Do not allow the bottles to cool before opening.
To assure hybridization bottles remain leak proof and pressure proof, prevent temperatures above 70°C. If temperatures
above this are used without first relieving the pressure within the bottle, there is a risk that bottles will leak and/or break
due to internal pressure build up.
If the bottles are accidentally taken above 70°C without relieving the pressure, DO NOT open the hybridizer door. Turn off
the hybridizer and allow it to cool before opening the door and checking the contents of the oven. Should the bottles be
used above 70°C, relieve the pressure by unscrewing and re-tightening the cap.
If using radioactive material see the “Decontamination” section of this manual under “Service Procedures”.

UVP Minidizer Hybridization Oven 4
81-0169-02 Rev J
Hybridization Oven Specifications
UVP Minidizer Hybridization Oven
Part Number Volts/Hz
95-0330-01 115V/60Hz
95-0330-02 230V/50Hz
95-0330-03 100V/50Hz
Specifications
Net Weight: 11.3 lbs (5 kg)
Temperature: Ambient +10°C to 80°C
Heating Element: 500 watts
Temperature Display: LCD
Rotation Speed: 12 RPM
Bottle Capacity: Four (4) 35x150mm, Eight (8) 50ml, or Eight (8) 15ml
Dimensions: 9”W x 13”H x 8”D (229 x 330 x 203mm)

UVP Minidizer Hybridization Oven 5
81-0169-02 Rev J
Installing the bottles and tubes
Installing the carousel
Installation
The Minidizer Hybridization Oven has capacity for four 35x150mm bottles and eight 50ml or 15ml conical
plastic tubes. Combinations of multiple-sized bottles may be used at the same time.
1. To insert bottles or tubes into the carousel, gently
press them into the clips.
2. To insert bottle holder, begin by placing the large end
of the bottle holder into the slotted holder on the right
wall. Twist until the shaft locks into place, then slide the
rod end into the black holder on the left wall. Compress
the spring-loaded locking pins and rotate until aligned
with the spindle on the right wall.
NOTE: ALWAYS USE AN EVEN NUMBER OF BOTTLES AND LOAD
BOTTLES OPPOSITE EACH OTHER TO BALANCE THE BOTTLE
HOLDER. THIS PREVENTS EXCESSIVE WEAR OF THE BEARINGS
AND DRIVE MOTOR.

UVP Minidizer Hybridization Oven 6
81-0169-02 Rev J
Temperature
Display: Press the
up and down
arrows to set the
temperature
Power: Press the
power switch to
the “I” position
operate the
temperature
Motor: Press the
power switch to
the “I” position
rotate the carousel
Operation
Caution: This equipment is not intended for interconnection with any other devices. Use of this equipment other than as
intended may create a safety hazard and/or malfunction.
Using the Hybridization Oven
1. Place the unit on a level working surface and provide adequate room in front of the door to allow easy opening.
2. Plug the female end of the power cord into the back of the unit and the male end into a surge-protected outlet.
3. To turn on the main power supply, press the Power switch toward “ON” on the right side of the control panel.
4. To turn on the motor control to rotate the carousel, press the motor control power switch to the “ON” position.
Temperature Calibration Controls
When the power is turned on, the software
revision number flashes for several
seconds. The display will then show
internal surface temperature (not air
temperature) for a few seconds. The
display will then revert to the factory
preset temperature of 30°C.
Altering the Temperature
Setpoint
The current setpoint value can be altered
using the “UP” and “DOWN” buttons while
the setpoint is being displayed. To change the setpoint from normal
mode, proceed as follows:
1. Press then release either the “UP” or the “DOWN” button.
The LCD will flash to indicate that the displayed value is the current setpoint. If either button is held
down for more than several seconds, setpoint value will increase or decrease incrementally.
2. When the desired setpoint is reached, wait approximately five seconds without pressing either button;
the display will revert to normal mode showing the actual temperature. The new setpoint becomes
effective. When the unit is turned off and turned on again, the last used setpoint will be displayed.
3. Allow sufficient time for warm-up prior to hybridization procedures.
Temperature Calibration
The hybridization oven is calibrated at the Analytik Jena factory. AJ recommends temperature recalibration be
performed at the AJ factory as recalibration by the user may void the warranty. To return the unit to AJ, first
obtain a RGA (Returned Goods Authorization) number from AJ.
Call AJ’s customer service department in Upland, California at [phone] or Cambridge, UK at +44(0)1223-
420022 to obtain an RGA number or to inquire about temperature calibration.
Service Procedures
Care and Cleaning
NOTE: ALWAYS UNPLUG THE UNIT FROM THE ELECTRICAL SUPPLY BEFORE CLEANING OR DRYING THE UNIT!

UVP Minidizer Hybridization Oven 7
81-0169-02 Rev J
The units are built to provide trouble-free operation for the life of the system. To ensure correct operation:
•Wipe any water from inside and outside the unit with a soft cloth or sponge.
•Use soap and water with a soft cloth or sponge to clean the unit.
•Do not allow chemicals to remain on unit surfaces.
•Never clean unit with abrasive pads or cleaners.
•Never clean unit with acetone or chloroform.
Bottle Care
Analytik Jena’s hybridization bottles are made of thick walled borosilicate glass which helps protect users from
radiation and has excellent long-term reliability.
•It is important to check the bottles regularly for chips, stress fractures and cracks. If this occurs, the
bottle must be replaced.
•Ensure bottles are stored either in a suitable rack or with caps replaced in between experiments. This
will protect the bottle and sealing area.
•Replace O-rings/PTFE seals when worn or leaky; replace O-rings or PTFE seals every six months.
•Wear protective gloves to protect your hands in the event of an accidental breakage.
•Never over tighten caps on the bottles. Hand tightening is sufficient.
•If the cap is difficult to unscrew, NEVER ATTEMPT to force the bottle cap open. Allow the bottle to cool
and retry. If the cap remains stuck, discard the bottle.
•The bottles should not be used at temperatures above 70°C.
Decontamination
Bottles and Caps*
•Soak items in a diluted detergent solution overnight.
•Remove from detergent and rinse items with distilled water.
•If items are still contaminated, gently scrub with an abrasive cloth or brush. If necessary, continue to
soak items in the detergent solution for a longer period of time.
Oven Chamber*
The oven chamber and drip tray may be decontaminated by wiping clean with a decontaminating agent,
then repeating with distilled water.
*NOTE: These decontamination methods may not remove all contaminants. Refer to Federal, State and local
guidelines and biological protocols to ensure decontamination.
NOTE: If any unit requires service, a Returned Goods Authorization number (RGA) must be obtained from AJ’s
Customer Service department prior to returning any item to AJ. If radioactive or biological hazardous materials
have been present within the unit, radioactive decontamination and biological cleanup as per current Federal,
State, and local guidelines and biological protocols must be performed BEFORE returning the unit.
Replacement Parts and Accessories
Replacement parts lists are provided below for the UVP Minidizer Hybridization Oven. Repairs or replacement
other than specified in the following procedures shall be done only by authorized service personnel.
PART NUMBER DESCRIPTION QUANTITY
76-0070-02 Bottle Carousel Holder 1 Required
63-0024-02 Carousel Shaft Assembly 1 Required

UVP Minidizer Hybridization Oven 8
81-0169-02 Rev J
68-0088-01 Carousel Pillow Block 1 Required
46-0024-02 Motor Drive Coupler Assembly 1 Required
56-0022-01 Fuse, 3AMP/250V 5x20mm (Sold Individually)2 Required
88-0004-01 Bottle Cap and O-Ring/PTFE Seal
07-0194-01 Borosilicate glass bottle with polypropylene
cap and PTFE seal, 35 x 150 mm
58-0085-01 Power Cord (115V)
58-0085-03 Power Cord (230V)
Technical Support
Analytik Jena offers expert technical support on all AJ products. If there are any questions about product use,
operation or repair, contact AJ’s offices at the locations below.
NOTE: A Returned Goods Authorization (RGA) number must be obtained from AJ’s Customer Service prior to
returning any product.
If you are in North America, South America, East
Asia or Australia:
If you are in Europe, Africa, the Middle East or
Western Asia:
Call [phone], and ask for Technical
Support during regular business days, between 7:00
am and 5:00 pm, PST.
Call [phone], and ask for Customer
Service during regular business days between 9:00 am
and 5:30 pm.
E-mail your message to: [e-mail]
or [email protected]-jena.com E-mail your message to: [e-mail]
Fax Technical Support at [phone] Fax Customer Service at
[phone]
Write to: Analytik Jena 2066 W. 11th Street, Upland,
CA 91786 USA
Write to: Ultra-Violet Products Ltd. Unit 1, Trinity Hall
Farm Estate, Nuffield Road, Cambridge CB4 1TG UK

UVP Minidizer Hybridization Oven 9
81-0169-02 Rev J
Warranty
Analytik Jena’s quality hybridization ovens are guaranteed to be free of defects in materials, workmanship and
manufacture for one (1) year from the date of purchase. Consumable and disposable parts including, but not limited
to bottles, tubes and filters, are guaranteed to be free from defects in manufacture and materials for ninety (90)
days from the date of purchase. If equipment failure or malfunction occurs during the warranty period, AJ shall
examine the inoperative equipment and have the option of repairing or replacing any part(s) which, in the
judgment of AJ, were originally defective or became so under conditions of normal usage and service.
No warranty shall apply to any instrument, or part thereof, that has been subject to accident, negligence, alteration,
abuse or misuse by the end user. Moreover, AJ makes no warranties whatsoever with respect to parts not supplied
by AJ or that have been installed, used and/or serviced other than in strict compliance with the instructions
appearing in the operational manual supplied to the end user.
In no event shall AJ be responsible to the end user for any incidental or consequential damages, whether
foreseeable or not, including but not limited to property damage, inability to use equipment, lost business, lost
profits or inconvenience arising out of or connected with the use of instruments produced by AJ. Nor is AJ liable or
responsible for any personal injuries occurring as a result of the use, installation and/or servicing of equipment. This
warranty does not supersede any statutory rights that may be available in certain countries.

UVP Minidizer Hybridization Oven 10
81-0169-02 Rev J
Hybridization Techniques
There are really two main steps to a hybridization reaction: hybridizing two strands of complementary DNA, and detection
of the hybridized DNA. Nucleic acid hybridization is a mechanism where strands of DNA in a single stranded state have
their complements bind together. The proximity of the DNA strands to each other determines the frequency of the binding
events and, in fact, successful binding is proportional to their concentration. The concentration of the target (nucleic acid)
is the independent variable in all hybridization reactions.
Since the target concentration is usually the unknown variable, an excess of labeled probes (what you use to find the
target) will drive the reaction, thus decreasing the time for the probe to hybridize to a target. This is simply increasing the
chances of a probe bumping into a target. However, with an enormous amount of probe around (in the solution or on the
surface of a membrane), the background signal will also be enormous. The typical approach to correct for excess
background (noise) on a membrane or slide hybridization is to wash it in a low salt buffer, as this favors the disassociation
of unbound probe from the membrane/slide and non-complementary DNA. In solutions, a probe can be enzymatically
degraded by using a single strand-specific nuclease.
Mechanisms of Nucleic Hybridization
Hybridization occurs with a process called nucleationwhereby
the two separate nucleic acid strands come into close proximity
of each other. A duplex region is formed where a minimum of
three bases of one strand complements to those on the second
strand. If the remainder of the strands are complementary, the
two strands will anneal or zipper together very quickly. The rate-
limiting step in nucleic acid hybridization is the duplex
formation, which again explains why probe-to-target
concentrations are critical.
Experimental Protocols
There are many different protocols available on the web, in journals, and in text references and we reference
several at the end of this text.
1. Concentration of Species
Target:How much target molecule depends on the species you expect to find. Cellular constituents may
be expressed in large or small amounts; the trick is to start with enough target (~25 g) and determine
experimentally.
Probe:Plan to have more probe than expected target. To answer questions about adding too much
probe, run an extinction experiment: serially increase the amount of target by a factor of two and use a
fixed amount of probe. Hybridize for a short length of time and quantitate the amount of probe that
has hybridized. As long as the signal increases and shows linearity there is excess probe (Fig 2). If the
signal levels off and a loss of linearity noticed, then the probe is not in excess (Fig 2).
2. Length of Probe
The goal is to increase hybridization efficiency while minimizing background. In most cases probes
range from 20 – 1000 bps.